Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1199 ATGACTCCTTTTTACTTCCTCCTATTTGCCTTCATCCTTTTCCTCTCCATAAACTTCTTGATCCAAACAAGAAGGTTCAAAAACCTTCCTCCGGGACCATTTTCTTTCCCTATAATCGGAAACCTCCACCAACTCAAGCAACCCCTCCACCGCACGTTCCATGCCTTATCACAAAAATATGGCCCTATTTTCTCCCTCTGGTTCGGCTCCCGTTTTGTCGTCGTCGTTTCGTCGCCGCTCGCGGTGCAAGAATGCTTCACCAAGAACGACATCGTCTTGGCCAACCGCCCTCACTTCCTCACCGGCAAGTATATAGGGTACAACAACACCACCGTCGCCGTTTCCCCCTACGGCGACCACTGGCGCAACCTCCGCCGCATCATGGCGCTCGAGGTTCTCTCCACCCACCGGATAAACTCCTTCTTGGAAAATCGGAGGGACGAGATCATGAGGCTCGTGCAAAAGCTTGCTCGGGACTCGCGCAATGGCTTCACCAAAGTAGAACTTAAATCCAGGTTTTCGGAGATGACATTTAACACTATAATGAGGATGGTGTCAGGGAAGAGGTACTATGGTGAAGACTGTGATGTGAGTGATGTACAGGAAGCAAGGCAATTTAGAGAGATCATTAAAGAGTTGGTGACGTTAGGAGGGGCTAATAACCCTGGGGACTTCTTGGCTTTGCTTAGGTGGTTTGATTTTGATGGTTTGGAGAAGAGACTAAAGAGGATTAGTAAGAGAACCGATGCGTTTTTACAAGGACTCATTGATCAGCATCGTAATGGAAAGCATCGTGCCAATACTATGATAGATCATCTTCTTGCTCAACAGCAATCACAACCTGAATATTACACCGATCAAATCATCAAAGGACTTGCACTGGTAATGCTACTTGCAGGAACAGATACATCAGCAGTAACTTTAGAATGGGCAATGTCTAATTTATTAAACCATCCAGAAATATTAAAGAAGGCAAAAAATGAATTAGACACTCATATAGGACAAGATCGTCTAGTAGATGAGCCTGACATTCCAAAACTCCCTTACCTTCAAAGCATTGTTTATGAGACACTTCGTTTGCATCCTGCTGCTCCAATGTTGGTACCCCATTTGTCTTCAGAAGATTGCACCATAGGAGAATATAATATCCCACAAAACACAATTTTGTTGGTGAATGCTTGGGCCATTCATAGAGATCCCAAGTTGTGGAGTGACCCAACACACTTTAAGCCTGAGAGGTTTGAGAATGAAAGTGAAGCAAACAAGTTACTTCCATTTGGGTTAGGGAGGAGGGCTTGCCCTGGAGCTAACTTGGCTCAACGCACACTGAGCTTAACTCTGGCCTTATTAATCCAATGTTTTGAGTGGAAAAGGACTACTAAAAAAGAAATTGATATGACTGAAGGAAAGGGACTTACTGTGTCAAAAAAATATCCCTTAGAAGCTATGTGCCAAGTGTGCCAATCACTGACAGTTAAGGATATTTATAACTTCTAG 1497 0.4422 MTPFYFLLFAFILFLSINFLIQTRRFKNLPPGPFSFPIIGNLHQLKQPLHRTFHALSQKYGPIFSLWFGSRFVVVVSSPLAVQECFTKNDIVLANRPHFLTGKYIGYNNTTVAVSPYGDHWRNLRRIMALEVLSTHRINSFLENRRDEIMRLVQKLARDSRNGFTKVELKSRFSEMTFNTIMRMVSGKRYYGEDCDVSDVQEARQFREIIKELVTLGGANNPGDFLALLRWFDFDGLEKRLKRISKRTDAFLQGLIDQHRNGKHRANTMIDHLLAQQQSQPEYYTDQIIKGLALVMLLAGTDTSAVTLEWAMSNLLNHPEILKKAKNELDTHIGQDRLVDEPDIPKLPYLQSIVYETLRLHPAAPMLVPHLSSEDCTIGEYNIPQNTILLVNAWAIHRDPKLWSDPTHFKPERFENESEANKLLPFGLGRRACPGANLAQRTLSLTLALLIQCFEWKRTTKKEIDMTEGKGLTVSKKYPLEAMCQVCQSLTVKDIYNF* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1199 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Gso16g1199 498 PANTHER CYTOCHROME P450, FAMILY 81, SUBFAMILY D, POLYPEPTIDE 2-RELATED 5 490 - -
Gso16g1199 498 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 Pfam Cytochrome P450 30 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 SUPERFAMILY Cytochrome P450 30 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 Gene3D Cytochrome P450 19 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 5 490 - -
Gso16g1199 498 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 176 194 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1199 498 Coils Coil 139 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1199 Gso-Chr16 31233180 31236482 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1199 7 497 Cytochrome P450 AT4G37370 56.452 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1199 K13260 - gmx:100811727 993.416