Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1196 ATGGAACTCGAATCTGGAGTTTCAGCTTCTCAGAAGAATCCCTCTCAGTTGTCATGGGTAAATTTATCTAAAGATTTATTGTTAGCATATCAAAGCTTTGGTGTAGTGTATGGAGATCTAAGCACATCACCTCTCTATGTTTATACAAGCACATTATCAGGAAAGTTACAGAGCCACCTTAATGAAGAAGTTATCTTTGGGATTTTTTCGTTGATTTTCTGGACCCTCACATTAATACCGTTGCTTAAATATGTAGTCATCATATTAAACGCTGATGATAATGGTGAAGGTGGGACATTCGCTCTTTATTCGCTGCTCTGTAGGCATGCAAATATTAGCTTACTCCCTAATCAACAAGCAGCTGATGAGGAGATGTCATGCTACAAAAATGGTCTCTCACCAGAGGCTGCGGAATCATCTTCATTGAAGAGGTTTTTGGAGAATCATAGAAGTTTAAAAACAGCCCTGCTGGTTGTGGTGTTGCTAGGTGCTTGCATGGTCATAGGTGATGGTGTGTTTTCTCCAGCAATTTCAATTCTAGCAGCAGTATCAGGAGTTCGAGTTACCAAAACAAAATTCACTGATGTTGAAGTTGTCCTGATAGCATGTGTCATATTGGTTGGCCTATTTGCTCTCCAACATTATGGCACACACAAAGTTGCATTTGTGTTTGCACCTGTAGTAATCATCTGGCTTGCAGCCATTTTTTCTATTGGACTTTACAATATAATATATTGGAATCCAAAAATATTCCATGCTATATCCCCACTCTATTTAATCAAGTTCTTTATCAAGAATGCTAAAGAAGGTTGGATTTCACTTGGAGGGATGCTTCTGTGTATTACTGGAACTGAAGCTATGTTTGCGGATATTGGTCATTTTACTACATTGTCAATAAGGCTTGCCTTTGCCTTTGTTATATACCCTTGTTTGGTAGTGCAATACATGGGCCAAGCAGCTTTTTTGTCGAAAAACCTTAACTCTGTCCATAATAGTTTTTATGACTCTATACCTGAACCTATACTTTGGCCAGTTTTTGTTATTGCCACCCTTGCAGCTATTGTTGGAAGTCAAGCTGTTATTACTGCCACTTTCTCCATCATCAAGCAGTGCCATGTACTTGGTTGCTTTCCACGAGTCAAAATCGTACACACCTCAAAGCATATGTTTGGACAAATCTACATCCCAGAAATCAACTGGATACTTATGATCTTGACCCTTGCTGTAACCATTGGATTTCGGGACACAACCTTAATTGGAAATGCTTATGGCCTTGCTTGTATGACGGTTATGTTTGTGACTACATTTCTGATGGCACTAGTCATAATGTTTGTCTGGCAGAAAAACATTCTGATTGCCACAATATTCCTTCTGTTTTTTTGGGTGATAGAGGGTTTATATCTATCTGCAGCATTGATAAAAGTGTTTCAAGGAGGATGGGTTCCTCTTGTCTTATCTTTCATCTTCATGCTTGTTATGCATGTATGGCATTATGGCACTTGTACCAAGTACAACTACGATCTAAGCAACAAAGTTTCATTGAAATGGTTACTGGCTTTGGGCCCTAGCCTTGGTGTTGCCCGTGTCCCCGGGATTGGTCTCATCTACACAGAACTTGCAACAGGAATACCTGCAATATTTTCCCACTTTGTAACCAACCTCCCTGCATTTCACATGGTGTTGGTCTTTGTTTGTGTGAAAACAGTTCCTGTTCCACATGTATTAACCAAAGAACGTTTCCTAATCGGGCGAGTTTGTCCGAGACCATATCGAATGTATAGGTGCACTGTCAGATATGGATACAAGGACATTAGAAGGGATGATAGAGACTTTGACAACCATATCATACGATGTATAGCCGAGTTTATCCAAATAGAGGCGCAGGAATTACAACTCTCGATTTCTGAAACTTCTTCATTCGATGGAGGGACAACTATTATAAGTGTTAGAAGCTTCGAATCAGTTTCAAGTTGGACAGTGTCTGAGAATGAAGATGTTGGTGTGGACAACAACATTGCTAGTGGTAGATCTTTCTCTCGACAACCATCGATTTCCACTTATGACAAAGAAAACCCACATTCAAGAAGGCGCCACGTTAGTTTCCTGGTACCTGATGATCCTGCATTGGATCATGAAGTTAAGCAGGAGCTTCTTGATTTAGCTCAAGCTATGGAGGCTGGGGTTGCATATATAATGGGGCACACACATGTGAAGGCAAGGAAATCATCCTCATTATTGAAAAGGCTTGTGATCAATGTTGGGTATGCATTTCTTCGAACGAATTGCAGGGGTCCAGCTACGGCTCTTAACATTCCTCACATCAGTCTCATTGAAGTTGGAATGATATATTATGTGTAG 2358 0.4016 MELESGVSASQKNPSQLSWVNLSKDLLLAYQSFGVVYGDLSTSPLYVYTSTLSGKLQSHLNEEVIFGIFSLIFWTLTLIPLLKYVVIILNADDNGEGGTFALYSLLCRHANISLLPNQQAADEEMSCYKNGLSPEAAESSSLKRFLENHRSLKTALLVVVLLGACMVIGDGVFSPAISILAAVSGVRVTKTKFTDVEVVLIACVILVGLFALQHYGTHKVAFVFAPVVIIWLAAIFSIGLYNIIYWNPKIFHAISPLYLIKFFIKNAKEGWISLGGMLLCITGTEAMFADIGHFTTLSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVHNSFYDSIPEPILWPVFVIATLAAIVGSQAVITATFSIIKQCHVLGCFPRVKIVHTSKHMFGQIYIPEINWILMILTLAVTIGFRDTTLIGNAYGLACMTVMFVTTFLMALVIMFVWQKNILIATIFLLFFWVIEGLYLSAALIKVFQGGWVPLVLSFIFMLVMHVWHYGTCTKYNYDLSNKVSLKWLLALGPSLGVARVPGIGLIYTELATGIPAIFSHFVTNLPAFHMVLVFVCVKTVPVPHVLTKERFLIGRVCPRPYRMYRCTVRYGYKDIRRDDRDFDNHIIRCIAEFIQIEAQELQLSISETSSFDGGTTIISVRSFESVSSWTVSENEDVGVDNNIASGRSFSRQPSISTYDKENPHSRRRHVSFLVPDDPALDHEVKQELLDLAQAMEAGVAYIMGHTHVKARKSSSLLKRLVINVGYAFLRTNCRGPATALNIPHISLIEVGMIYYV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1196 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 22 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso16g1196 785 PANTHER POTASSIUM TRANSPORTER 4 22 785 - -
Gso16g1196 785 TIGRFAM kup: potassium uptake protein 28 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso16g1196 785 Pfam K+ potassium transporter 30 603 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1196 Gso-Chr16 31203020 31208271 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1196 4 785 Inorganic Solute Cotransporters AT3G02050 69.975 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1196 K03549 - gmx:100810134 1562.74