Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1192 ATGGTAAGCATTTTATCTTCTTACACAGTGATTCCTAGTGAGGCTACACCAAATTGTAGTCTCTTGTTATCTGAGAGTGAGCAAATCAATGCTCCCACTCATTCGCTCACCATCTACGTCTACAAGCCAAATCATCTCAACAAAATTATCCCCAACATGAACATGGTTGATACAATGAGAGACTCTCTTGCCAAGATCTTAGTCCACTATTACCCACTAGCTGGCCGGCTACGCATGATACAAGGTAGAAGATGGGAAGTGGAGTGCAATGCAAAGGGTGTGATATTGTTGGAAGCTGAATCCACAAGAGCACTTAATGACTACGCTATCTTTGAACCCAACGACACCATTAAAGAACTTATTCCCAAAGTTGATTACACCGAACCCATTGAGAATTCACCATTGTTTCTAGTGCAGTTGACAAGATTCTCCAATGGTGGCTTCTGTGTTGGCATTGCCATTTCAAACATCATTACTGATGGGATTTCCGGCACTCACTTCATCAACTTGTGGGCAACGTTGGCTCGAAGAGACACCTTGGAGGAACACGACATGCCACTTCTGAACAAAGTGGTTCTTCAAAGTTCGGACAAAAAACCATGCTTTGATCACAAAGAATTCAAGCCATTGCCACTTGTACTAGGTCACGCTGACACCACGGAGGAGAGTAAGAAGGAGACAACAGTTGCAATGTTGAAACTCTCAAGAGAAATGGTGGAGAAGCTTAAGAAGAAAGCCAATGAGGGCAACCAGGGTCGAGCTTATAGCAGATATGAGAGCATCTCGGCTCATATATGGCGATGTGTCGTGAAGGCTCGTGACGGGTATCACAATCAACCAACAGTCGTACACATTATTGCTGGTGCAAGAAACAGATTGAACCCACCTTTACCTTTAAACTATTTTGGAAACGCAACGTATCCAACAGTGACACCGACATGCCTAAGTGGGGACATAGTGTCAAAACCCTTGAGCTACGTGGCTCACAAGATAAGGGAAGCAATTGAAGTGTTAACAGATGAGTATCTAAGGTCAGGGTTTGGTTTTATTAGGAGTCAGAGTGATGTGGGGTGGCTTAGGGGAAAAAATGATAATGAAGGGAAAGTGGAGTCCTTGTTTCTTGGGAACCCTAACCTGAACATTTGGAGCTGGATGAGAAACATGCCAATGTATGGGCCAAATTTTGGGTGGGGGAGGCCTGTGTATATGGGCCCAGGTGCTGTGAAAGGGGATGGAAGGGCATTCATTATGCCAGGTCAAGAGGATGGGTCTGTTTTAGTGGCTATTAGGTTGCAAAGTGCTCATGTTGAAGCCTTTAAGGAGGTCTTCCACAAGGACATGTGA 1344 0.4457 MVSILSSYTVIPSEATPNCSLLLSESEQINAPTHSLTIYVYKPNHLNKIIPNMNMVDTMRDSLAKILVHYYPLAGRLRMIQGRRWEVECNAKGVILLEAESTRALNDYAIFEPNDTIKELIPKVDYTEPIENSPLFLVQLTRFSNGGFCVGIAISNIITDGISGTHFINLWATLARRDTLEEHDMPLLNKVVLQSSDKKPCFDHKEFKPLPLVLGHADTTEESKKETTVAMLKLSREMVEKLKKKANEGNQGRAYSRYESISAHIWRCVVKARDGYHNQPTVVHIIAGARNRLNPPLPLNYFGNATYPTVTPTCLSGDIVSKPLSYVAHKIREAIEVLTDEYLRSGFGFIRSQSDVGWLRGKNDNEGKVESLFLGNPNLNIWSWMRNMPMYGPNFGWGRPVYMGPGAVKGDGRAFIMPGQEDGSVLVAIRLQSAHVEAFKEVFHKDM* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1192 447 Gene3D - 215 445 IPR023213 -
Gso16g1192 447 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 447 - -
Gso16g1192 447 Pfam Transferase family 1 443 - -
Gso16g1192 447 Gene3D - 1 209 IPR023213 -
Gso16g1192 447 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 6 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1192 Gso-Chr16 31152602 31155367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1192 2 445 Monolignol Biosynthesis Gene Families AT5G48930 35.347 2.72e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1192 K13065 - gmx:100779652 905.205