Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1172 ATGGCTGCCAACACATTGATGAGTTCTGCCATCTCAGCCTTCCCATCTCTCCTTTCCTCCTCAAAATCCAGATTTGCCGCAGCAGTTCCTCTTTCCAGCTTTGTTGTCACCAATGCCTCTTCTTCTCGCTTTTCCATGAGTGCTGACTGGATGCCTGGCCAGCCTAGACCCCCCTACCTTGATGGTTCAGCACCTGGTGACTTTGGATTCGACCCTCTTCGTCTTGGTGAAGTACCAGAGAATCTTGAGAGGTTCAAAGAGTCAGAACTCATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGGATTTTGGTTCCAGAGGCATTGGGCTTAGGCAACTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGTGGCCAAGCAACCTACCTAGGCAGCCCAGTTCCATGGGGCACCCTACCCACCATTCTGGCCATTGAATTCCTTGCTATTTCCTTCGTGGAGCACCAAAGGAGCATGGAGAAGGACCCTGAAAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCTAAGGACCCTAAAACATTCCACGAATACAAAGTCAAAGAAATTAAAAATGGACGTCTTGCTTTGTTGGCTTTTGTGGGATTCTGTGTTCAACAATCAGCTTATCCCGGCACTGGACCTTTGGAGAACTTGGCTGCTCACTTGGCTGATCCATGGCACAACAACATTGGAAACGTCATTATTCCACAATCGATTTTGCCTTGA 741 0.4885 MAANTLMSSAISAFPSLLSSSKSRFAAAVPLSSFVVTNASSSRFSMSADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAVPGGQATYLGSPVPWGTLPTILAIEFLAISFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPKTFHEYKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAAHLADPWHNNIGNVIIPQSILP* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1172 246 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 21 236 IPR001344 GO:0009765|GO:0016020
Gso16g1172 246 SUPERFAMILY Chlorophyll a-b binding protein 41 240 - -
Gso16g1172 246 Pfam Chlorophyll A-B binding protein 57 211 IPR022796 -
Gso16g1172 246 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC 21 236 - -
Gso16g1172 246 Gene3D Chlorophyll a/b binding protein domain 51 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1172 Gso-Chr16 30934985 30937284 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1172 1 198 Chloroplast and Mitochondria Gene Families AT3G54890 80.000 1.49e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1172 K08907 - gmx:100800350 486.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1172 16 30934985 30937284 Gso2g0537 2 5690182 5692309 GST