LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso16g1166	ATGGAATGTTCCCAATTCTCTGTTTTTTTGCTTTTGTCCATTTTTGTGGGAATTTGTTTAGCTTCTACTGAGGAACAGGAAAGGGACAGGATTGCCAAGCTGCCAGGACAACCAGAAAATGTGCTATTTGCACACTACTCAGGCTATGTGACTGTGAATGAAGAAGCTGGGAGAGCATTGTTCTATTGGCTGGTTGAGACACCAGCTAGTATTGAACCAAGTTCAAGACCACTAGTGTTGTGGCTCAATGGTGGACCTGGATGCTCCTCTATTGGTTATGGAGCAGCTGAAGAAATTGGCCCTTTTAGAATTAATTCTGATGGGAATTCACTTTACTCCAATCCTTATGCTTGGAACAACTTGGCAAATATACTCTTCCTTGATTCTCCTGCTGGTGTTGGCTTTTCATATTCTAACACAACATCTGATCTGTATACAGCAGGTGACCAAAGGACAGCTGAAGATGCATATACATTCCTTGTTAATTGGTTTGAAAGATTTCCTCAGTATAAGCATAGAGATTTCTACATTGCTGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGTCTCAACTTGTTTACCGGAGAAATAAAGGAATCGAGAATCCAGTTATAAATTTCAAGGGTTTTATGGTTGGAAATGCAGTCATTGATGATTTCCATGATTATATTGGAACATTTGAGTACTGGTGGGTCAATGGTTTGATTTCAGATTCCACATATAAGAAGCTGGGAATTGCCTGTGACTTTTATTCTTCTGAGCATCCACCAGAGAATTGTGTGGAAGCTCTCGAACTTGCAACTTTGGAGCAGGGAAACATTGATCCATATAGCATTTATACACCAGTATGCAATGATATAGCAGCAATCAAACGCCGTTTGGGGGGTCGCTATCCATGGTTGTCTCGAGCATATGATCCCTGTACTGAGAGGTACTCTACCTTGTATTTCAATCGTCCAGAAGTTCAGAAGGCACTTCATGCCAATGTAACTGGGATTCCTTATTCATGGGCAGGATGCAATGATGTTATTGTGGAAAATTGGGGTGATTCTCCGCTATCTATGCTTCCAATATATCAAGAACTTATTGAAGGTGGTATCAGAATATGGGTATTCAGTGGAGACACTGATTCAGTAGTTCCTGTAACCGCGTCTCGGTATTCAATCCGTGCCTTGAACCTATCTACCATCATCAATTGGTACGCTTGGTATGATAATGACGAGGTTGGTGGCTGGAGTCAAGTTTATGAGGGGCTTACATTGGTTACAGTAAGAGGGGCAGGGCACGAGGTTCCACTTCATAAACCCCGCCAAGGTTTTATCCTTTTCAAGACATTCTTGGAGGACAAGAACATGCCATTGCCAATTGATAGAAGCCTTAGTGGCCCAACTGATAAATCACTGAACAAGAACATTCGGTTGGCTAGGCCCATACGCAAGATCACTATGCCATCATCGACGCAGGGCTTTACTTATTAG	1482	0.4211	MECSQFSVFLLLSIFVGICLASTEEQERDRIAKLPGQPENVLFAHYSGYVTVNEEAGRALFYWLVETPASIEPSSRPLVLWLNGGPGCSSIGYGAAEEIGPFRINSDGNSLYSNPYAWNNLANILFLDSPAGVGFSYSNTTSDLYTAGDQRTAEDAYTFLVNWFERFPQYKHRDFYIAGESYAGHYVPQLSQLVYRRNKGIENPVINFKGFMVGNAVIDDFHDYIGTFEYWWVNGLISDSTYKKLGIACDFYSSEHPPENCVEALELATLEQGNIDPYSIYTPVCNDIAAIKRRLGGRYPWLSRAYDPCTERYSTLYFNRPEVQKALHANVTGIPYSWAGCNDVIVENWGDSPLSMLPIYQELIEGGIRIWVFSGDTDSVVPVTASRYSIRALNLSTIINWYAWYDNDEVGGWSQVYEGLTLVTVRGAGHEVPLHKPRQGFILFKTFLEDKNMPLPIDRSLSGPTDKSLNKNIRLARPIRKITMPSSTQGFTY*	494

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso16g1166	493	Gene3D	-	356	449	-	-
	Gso16g1166	493	PRINTS	Carboxypeptidase C serine protease (S10) family signature	114	126	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	PRINTS	Carboxypeptidase C serine protease (S10) family signature	127	137	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	PRINTS	Carboxypeptidase C serine protease (S10) family signature	163	188	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	PRINTS	Carboxypeptidase C serine protease (S10) family signature	420	433	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	Pfam	Serine carboxypeptidase	35	449	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	Gene3D	-	309	345	-	-
	Gso16g1166	493	PANTHER	SERINE CARBOXYPEPTIDASE-LIKE 26	8	452	-	-
	Gso16g1166	493	ProSitePatterns	Serine carboxypeptidases, serine active site.	177	184	IPR018202	GO:0004185
	Gso16g1166	493	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	8	452	IPR001563	GO:0004185\|GO:0006508
	Gso16g1166	493	SUPERFAMILY	alpha/beta-Hydrolases	26	453	IPR029058	-
	Gso16g1166	493	ProSitePatterns	Serine carboxypeptidases, histidine active site.	420	437	IPR033124	GO:0004185
	Gso16g1166	493	Gene3D	alpha/beta hydrolase	25	287	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso16g1166	Gso-Chr16	30862311	30866254	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso16g1166	319	451	Calmodulin-binding Proteins	AT2G22960	30.597	2.98e-13	66.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso16g1166	K16297		-	gmx:100796815	1029.24