Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1155 ATGATTACAATTTATAACACTGTTCCCTCAAATCTCCAGAAAATGTTTCACTACAACACAAAGTTCGCTATGGTCCTCACTTTCTTTATCTTCATGTTCTGTTTTTTCTGTTCAACGAGCGCCAGAAGTAACAACAATTGCGAGCGTAGCTGTGGAGAACATTCCCTGCAATACCCTTTTGGCTTCTCTTCTGATTGCGAAGTGAAACTAAATTGCAGCAAAGAGAACAAAGCTGAAATTGGCGAGTTAGAGGTTCAGAGCGTGACCTCTGATGGCATCTTCGTTAGTCTTCCGGTGCAGTGCAACCGCAGCGTGAGTTTCATTGACCCTCTCTTCAGAGACAACTTTGCTCCCACGTGGAACAACACCTTTCTTGTGCAGAGCTGCAAGCCCAAGCTCGATGGCTGTGTTATCCCCACATCGAGTTTCGCTGGCGGCCGCAAAGATGTGGAGGGGTGTGAAGATCTTAGTTGCTTCACGCAGTTGCAGAAGAGTAAGAGTAATGGCTCGAGGGAAGATGATGTTCTCACGCACAGTGATTGGGAGCGAGTTGGGTGTAGATTCTTGTTCTCTGCTCTTGCTTTTGATAGGAGTAAAGTGAAGGAGCTCTCGCTCCAATTTCAGATGGTTGAATTGGGGTGGTGGCTTCAAGGAAACTGTAGTTGCTCCAACAATGCGTCCTGCACGGAGGTGAATACTGATGGTGGAAAACGAGGCTTCCGGTGCCGCTGCGATGAAGGTTTCATCGGAGACGGATTCAGAGCCGGCGATGGTTGCCGGAGAGTTTCTGAATGCAAAGCTTCAACACTGTGGTCTGGCGGATGTAGGAAAGCAGTCAAAATTGGTGTCCTTGTTGGAGGGATCATATTTGGAGGTATCCTTGTGGCTGCTCTGTTTCTTGTATGTTACTTTAATAGGCGTCAGTCCTCTTGGCTGAGAAAACAAGTGACAGTAAAGCGCCTATTACGCGAAGCTGCAGGAGACTCCACTGTTCCTCTATATCCCTACAAAGAAATAGAGAGAGCCACCAGTTTTTTCTCTGAAAAACATAGGCTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACCTTCACAATGATGAGTGTGTTGCTATAAAAAAGATTAAGTATAGAGACACCAACAGTGTTGACCAAGTTATGAATGAGATCAAGCTCCTTTCTTCGGTGAGTCACCCGAATTTAGTGCGCCTCTTAGGTTGCTGCATAGAAGGGGGAGAGCAGATACTTGTTTATGAGTACATGCCAAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGGTGGAGTACTTCCATGGACAATAAGACTCACCATTGCTACTGAAACCGCTAATGCTATAGCATATCTCCATTCCGCAAATGATCATCCAATTTATCATAGAGACATAAAATCCAGCAACATACTCTTGGATTATAATTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATTTCGACCGCCCCACAAGGGACCCCGGGCTATGTTGATCCTCAATACCACCAGAACTTCCACCTTTCTGATAAAAGTGACGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCATGAAAGTGGTTGATTTCGCACGGCCTCAGAGTGAAATCAACTTGGCTGCACTTGCTGTTGATAGGATCAAGAAGGGTTGCATAGATGACATCATAGATCCCTTCCTTGAGCCACATAGGGATGCTTGGACGCTCTATTCTATTAACAAGGTGGCTGAGCTTGCATTTAGATGCCTTGCTTTTCATAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTAGATCTTATCAGGCGCAGTGGGTGGGCGACCATGGAGGAAACCATATGCATGGCTTCTTCGGTTGGGTCCGTGTGTTCATCGCCTCGAAATGGAAGTGTTAATTCACTTAGAGGTGTTAGTTTTGAGAGAGCTGCAGGACTTGGGAGTGAGACATTGATTGTTCCCCACAAGACTGATGTTTTTTTGCAATCAATTGAGGAGGTGAAGGACAGCTCTCCTGTGTCTGTGCATGATAGTTGGTTAAGTGGAACTAGCTCACCTTCAACAAATAGCTTGTTAGGACATGTAGTTCAGTGA 2151 0.4551 MITIYNTVPSNLQKMFHYNTKFAMVLTFFIFMFCFFCSTSARSNNNCERSCGEHSLQYPFGFSSDCEVKLNCSKENKAEIGELEVQSVTSDGIFVSLPVQCNRSVSFIDPLFRDNFAPTWNNTFLVQSCKPKLDGCVIPTSSFAGGRKDVEGCEDLSCFTQLQKSKSNGSREDDVLTHSDWERVGCRFLFSALAFDRSKVKELSLQFQMVELGWWLQGNCSCSNNASCTEVNTDGGKRGFRCRCDEGFIGDGFRAGDGCRRVSECKASTLWSGGCRKAVKIGVLVGGIIFGGILVAALFLVCYFNRRQSSWLRKQVTVKRLLREAAGDSTVPLYPYKEIERATSFFSEKHRLGTGAFGTVYAGHLHNDECVAIKKIKYRDTNSVDQVMNEIKLLSSVSHPNLVRLLGCCIEGGEQILVYEYMPNGTLSQHLQRERGGVLPWTIRLTIATETANAIAYLHSANDHPIYHRDIKSSNILLDYNFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEINLAALAVDRIKKGCIDDIIDPFLEPHRDAWTLYSINKVAELAFRCLAFHSDMRPTMIEVAEELDLIRRSGWATMEETICMASSVGSVCSSPRNGSVNSLRGVSFERAAGLGSETLIVPHKTDVFLQSIEEVKDSSPVSVHDSWLSGTSSPSTNSLLGHVVQ* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1155 716 Gene3D Transferase(Phosphotransferase) domain 1 422 637 - -
Gso16g1155 716 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1155 716 SMART serkin_6 346 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1155 716 Pfam Protein kinase domain 347 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1155 716 CDD STKc_IRAK 352 621 - -
Gso16g1155 716 Gene3D Laminin 214 257 - -
Gso16g1155 716 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Gso16g1155 716 Gene3D Phosphorylase Kinase; domain 1 307 421 - -
Gso16g1155 716 ProSitePatterns Protein kinases ATP-binding region signature. 352 375 IPR017441 GO:0005524
Gso16g1155 716 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 30 697 - -
Gso16g1155 716 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 30 697 IPR045274 GO:0007166
Gso16g1155 716 SUPERFAMILY Protein kinase-like (PK-like) 329 618 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1155 Gso-Chr16 30669054 30673981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1155 14 714 Receptor kinase-like Gene Family AT2G23450 54.648 0.0 725
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gso16g1155 Pkinase 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1155 - - gmx:100793114 1435.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0514 2 5485668 5490301 Gso16g1155 16 30669054 30673981 GST