Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1134 ATGGGGGCTGGGGAAGAGAGCACAGCTAAATCTTCTAAATCATCTTCATCAGCTCAGGATACACCAACAGCACCTGCATATCCTGATTGGTCAAGCTCCATGCAGGCCTATTATGCTCCTGGAGCCACTCCTCCTCCCTTTTTTGCCACAACCGTTGCTTCCCCAACTCCCCATCCCTATTTATGGGGAGGCCAGCATCCTTTGATGCCGCCATATGGGACTCCAGTCCCATATCCAGCTATATATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGACTCCAAGTGCTGTCCAGCAAAATACAGAGATTGAAGGGAAGGGAGCTGAAGGAAAATATCGGGACTCATCCAAAAAATTGAAAGGACCTTCTGCAAATACAGCTTCCAAAGCAGGAGAAAGTGGAAAGGCAGGCTCAGGTTCAGGCAATGATGGCATATCGCAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGCGATGAGAATACTAACCAACAGGAATCAGCTGCAAATAAGAAGGGAAGCTTTGACCTGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGCTGGTGCTATTTCTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCCCAATGCCAGCAACTAATCTTAACATTGGAATGGACTTGTGGAATGCATCTTCTGGTGGCGCTGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCGGGAGTTGCCCTTGGTGATCAATGGGTACAAGATGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCAAACCGAGAGTCAGCCAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAATCGCTGGGAGGTGAGAATCAAACTCTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCCGAAAATAATTCTATCAAGGAAGAGTTGGAGCGGTTGTGTGGTCCAGAAGCAGTTGCTAACCTGGATTAA 1014 0.4724 MGAGEESTAKSSKSSSSAQDTPTAPAYPDWSSSMQAYYAPGATPPPFFATTVASPTPHPYLWGGQHPLMPPYGTPVPYPAIYPPGSIYAHPSMAVTPSAVQQNTEIEGKGAEGKYRDSSKKLKGPSANTASKAGESGKAGSGSGNDGISQSGESGSEGSSNASDENTNQQESAANKKGSFDLMLVDGANAQNNSAGAISQSSVPGKPVVPMPATNLNIGMDLWNASSGGAEAAKMRHNQSGAPGVALGDQWVQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGGENQTLREELQRLSEECEKLTSENNSIKEELERLCGPEAVANLD* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1134 337 MobiDBLite consensus disorder prediction 7 30 - -
Gso16g1134 337 MobiDBLite consensus disorder prediction 122 176 - -
Gso16g1134 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 337 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso16g1134 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Gso16g1134 337 MobiDBLite consensus disorder prediction 1 30 - -
Gso16g1134 337 Coils Coil 268 323 - -
Gso16g1134 337 CDD bZIP_plant_GBF1 260 310 IPR045314 GO:0003700|GO:0006355
Gso16g1134 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Gso16g1134 337 SUPERFAMILY Leucine zipper domain 258 314 IPR046347 GO:0003700|GO:0006355
Gso16g1134 337 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Gso16g1134 337 Pfam bZIP transcription factor 255 317 IPR004827 GO:0003700|GO:0006355
Gso16g1134 337 MobiDBLite consensus disorder prediction 228 281 - -
Gso16g1134 337 Pfam G-box binding protein MFMR 1 93 IPR012900 -
Gso16g1134 337 Gene3D - 258 312 - -
Gso16g1134 337 MobiDBLite consensus disorder prediction 97 187 - -
Gso16g1134 337 PANTHER G-BOX-BINDING FACTOR 1 1 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1134 Gso-Chr16 30223008 30229414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1134 1 337 bZIP Transcription Factor Family AT4G36730 55.325 1.51e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso16g1134 MFMR 4.9e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1134 K09060 - gmx:778191 600.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0491 2 5185875 5191852 Gso16g1134 16 30223008 30229414 GST