Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1121 ATGGTGTTGAAGGCCGTCAGCAAGCCTACGCTAGAGAAAAACGGTTACGCGGTGCACGTGGAGTGCAAGGTCGCTATCATGCGCCAACTACGCCACCCGCACACAATAAGCCTCTACGAGGTCCTCGCCACGAGGACCAAAATCTACTTCGTGATGGAGTTCGCCGTGCGCGGCGAACTCTTTCACGTGGTTGCCGTGGAGGCCGTATACCATCATCAGAAGTACTTCTGGCAACTCCTCTCTTCCATGAGACACTGTCCCTCACACGGCGTATACCATCGCGATTTAAAGCTCGACAACATTCATTTCGACCAAGACATGAACCTCAATGTCTCCGACTTCGGATTGAGCGCGTTGAGGAGCCGGATCCAACACGACGGCATGTTACACAATTTGTGTGGGACCCCTGCATACGTGGCGCCCGAGATTCTCGCGAGGAAGGGGTACGACGGTGCCATCATGGACGTGTGGTCGTGCGACATCGTTTTGTTCGTGCTCAACGCTGGGTACTTACCCTTCAATGATTACAATGTTACGATTTTATATAGGAAGATCAAGAATCTAGTGACGAGGTTGTTAGACACGAATCCCGAGACAAGGATTGTTATGAACAAAAACTATTATATGTTATGCTAA 636 0.5047 MVLKAVSKPTLEKNGYAVHVECKVAIMRQLRHPHTISLYEVLATRTKIYFVMEFAVRGELFHVVAVEAVYHHQKYFWQLLSSMRHCPSHGVYHRDLKLDNIHFDQDMNLNVSDFGLSALRSRIQHDGMLHNLCGTPAYVAPEILARKGYDGAIMDVWSCDIVLFVLNAGYLPFNDYNVTILYRKIKNLVTRLLDTNPETRIVMNKNYYMLC* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1121 211 PANTHER - 2 205 - -
Gso16g1121 211 SMART serkin_6 2 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1121 211 SUPERFAMILY Protein kinase-like (PK-like) 2 204 IPR011009 -
Gso16g1121 211 Pfam Protein kinase domain 3 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1121 211 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14 2 205 - -
Gso16g1121 211 Gene3D Transferase(Phosphotransferase) domain 1 1 209 - -
Gso16g1121 211 ProSiteProfiles Protein kinase domain profile. 1 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1121 Gso-Chr16 29997736 29998371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1121 1 205 CBL-interacting serine-threonine protein kinases AT2G38490 50.901 1.37e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso16g1121 Pkinase 5.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1121 - K12761 gmx:102663863 437.958