Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1108 ATGAAAACAGAGCAGCACGTGGCCATGAAGGTGGTGGGAAAAGAAAAAGTGATAAAGGTCGGAATGATGGAGCAGGTGAAGAGGGAGATCTCGATGATGAAAATGGTGAAGCACCAAAACATCGTCGAACTCCACGAAGTCATGGCCAGCAAGTCCAAGATCTATATTGCCATGGAACTCGTCCGCGGCGGAGAGCTCTTCAACAAGGTCTCTAAAGGCCGCTTAAAGGAGGACGTGGCAAGACTCTACTTCCAGCAGTTAATCTCCGCCGTCAACTTCTGCCACAGCCGCGACATCTACCACCGCGACCTCAAGCCGGAAAACCTCCTCCTAGACGAACACGGCAACCTCAAAGTCTCCGACTTCGGACTCACCGCTTTCTCCGAACACCTCAAGGAGGACGGGCTGTTACACACCACGTGCGGCACGCCTGCGTACGTGTCGCCTGAAGTGATAGCGAAAAAAGGCTATGATGATGCCAAGGCTGATATATGGTCATGTGGTGTAATCCTCTACGTTCTCCTCGCAGGCTTTTTACCCTTTCAGGATGATAATTTGGTTGCCATGATAATTTGGTGGGGTTAA 585 0.5094 MKTEQHVAMKVVGKEKVIKVGMMEQVKREISMMKMVKHQNIVELHEVMASKSKIYIAMELVRGGELFNKVSKGRLKEDVARLYFQQLISAVNFCHSRDIYHRDLKPENLLLDEHGNLKVSDFGLTAFSEHLKEDGLLHTTCGTPAYVSPEVIAKKGYDDAKADIWSCGVILYVLLAGFLPFQDDNLVAMIIWWG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1108 194 Gene3D Transferase(Phosphotransferase) domain 1 1 191 - -
Gso16g1108 194 SMART serkin_6 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1108 194 Pfam Protein kinase domain 2 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1108 194 PANTHER - 2 194 - -
Gso16g1108 194 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 194 - -
Gso16g1108 194 ProSiteProfiles Protein kinase domain profile. 1 194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1108 194 SUPERFAMILY Protein kinase-like (PK-like) 2 192 IPR011009 -
Gso16g1108 194 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1108 Gso-Chr16 29842013 29842610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1108 1 189 CBL-interacting serine-threonine protein kinases AT4G30960 83.069 3.11e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso16g1108 Pkinase 3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1108 - K07198 gmx:100781111 360.147