Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1081 ATGTTGAATCTGTTAAGAGAAGAGGTACTATTGGTAGTGCAGAAGTATTATTACGACCTAATCATGGTCGCATTATTCACTATAGGAGTAACATATTTGGCTTCAAAAGCTTGGAAAAGAGCCACAACAAACAATAGAGAAGAAATCCCTGGCAGGTTGGGATTGCCTTTTATTGGGGAAACTTTTTCTTTTCTTTCAGCCACTAATAGCACAAGAGGATGCTATGATTTTGTCAGACTTAGGCGATTGTGGAATGGGAGATGGTTCAAGACAAGGCTATTTGGGAAGATCCACATATTTATTCCTAGTCCTGAAGGTGCAAGGACCATATTTGCTAATGACTTTGTTCTATTCAACAAGGGTTATGTAAAATCAATGGCAGATGCCGTGGGACAGAAAAGCTTGTTATGTGTACCCGTTGAGAGTCACAAAAGAATAAGGGGTCTTCTATCTGAACCATTTTCCATGACTTCCCTATCAGCATTTGTCACCAAATTTGACAAAATGTTATGTGGAAGGCTGCAAAAGCTAGAAGAAAGCGGGAAAAGTTTCAAAGTGTTGGACCTCTGTATGAAGATGACATTTGATGCAATGTGTGACATGCTGATGAGCATAACGGAGGATTCATTACTACGACAGATCGAGGAAGACTGCACTGCCGTCTCTGATGCCATGTTATCCATTCCTATAATGATTCCTCGCACCAGATACTATAAAGGCATCACGGCTCGTAAAAGGGTCATGGAAACTTTCGGAGAGATCATTGCCAGACGTAGGAGGGGGGAAGAAACTCCAGAGGACTTCCTTCAGTCCATGTTGCAGAGAGACTCACTCCCAGCCAGCGAAAAACTTGATGACTCGGAGATTATGGATAATCTGTTGACATTGATAATTGCTGGACAAACCACCACAGCAGCAGCAATGATGTGGAGTGTAAAGTTTCTACATGACAACAGAGAAACACAGGACATTCTCAGGGAAGAACAATTATCTATAACCAAAATGAAGCCAGAAGGAGCTTCAATTAACCATGAAGATCTCAACAGCATGCGTTATGGTTTGAAGGTAGTCAAGGAAACATTGAGAATGTCCAATGTCCTGTTATGGTTTCCTCGTGTTGCACTTGAAGACTGCACGATTGAAGGTGAGGAACTCAACTCCTCTGAAGATATCAATTCAATTATGTTCATTAAATATTTTAGATTAATTATAGGAGGGCTTTTATCGTTAGTTTTTCTTGTTGTCATGACTGTGTTACTAACTATACAAGTGGCAATAACAGGGTATGATATAAAGAAAGGTTGGCATGTTAACATCGATGCAACTCACATACATCACGACTCCGATTTGTACAAGGATCCATTGAAATTCAACCCACAAAGATTTGATGAAATGCAAAAGCCATACAGTTTCATACCTTTTGGATCAGGGCCTAGGACATGCCTTGGGATCAATATGGCGAAAGTGACAATGTTGGTCTTTTTACACAGACTCACTGGTGGTTACACGTGGACCCTTGATGATTTAGATACTTGCTTAGAAAAGAAGGCACACATACCCAGGCTAAGGAATGGCTGCCCAATAACTTTGAAGTCCTTAAGCAAAAGCATGCCAGAGGCATAA 1623 0.4073 MLNLLREEVLLVVQKYYYDLIMVALFTIGVTYLASKAWKRATTNNREEIPGRLGLPFIGETFSFLSATNSTRGCYDFVRLRRLWNGRWFKTRLFGKIHIFIPSPEGARTIFANDFVLFNKGYVKSMADAVGQKSLLCVPVESHKRIRGLLSEPFSMTSLSAFVTKFDKMLCGRLQKLEESGKSFKVLDLCMKMTFDAMCDMLMSITEDSLLRQIEEDCTAVSDAMLSIPIMIPRTRYYKGITARKRVMETFGEIIARRRRGEETPEDFLQSMLQRDSLPASEKLDDSEIMDNLLTLIIAGQTTTAAAMMWSVKFLHDNRETQDILREEQLSITKMKPEGASINHEDLNSMRYGLKVVKETLRMSNVLLWFPRVALEDCTIEGEELNSSEDINSIMFIKYFRLIIGGLLSLVFLVVMTVLLTIQVAITGYDIKKGWHVNIDATHIHHDSDLYKDPLKFNPQRFDEMQKPYSFIPFGSGPRTCLGINMAKVTMLVFLHRLTGGYTWTLDDLDTCLEKKAHIPRLRNGCPITLKSLSKSMPEA* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1081 540 Pfam Cytochrome P450 54 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 Pfam Cytochrome P450 421 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PANTHER CYTOCHROME P450 FAMILY PROTEIN 21 386 - -
Gso16g1081 540 PANTHER CYTOCHROME P450 FAMILY PROTEIN 422 533 - -
Gso16g1081 540 Gene3D Cytochrome P450 38 392 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 Gene3D Cytochrome P450 409 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 474 483 IPR017972 GO:0005506|GO:0016705
Gso16g1081 540 SUPERFAMILY Cytochrome P450 424 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS P450 superfamily signature 472 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS P450 superfamily signature 481 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS E-class P450 group I signature 440 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS E-class P450 group I signature 471 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PRINTS E-class P450 group I signature 481 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1081 540 PANTHER CYTOCHROME P450 26 21 386 - -
Gso16g1081 540 PANTHER CYTOCHROME P450 26 422 533 - -
Gso16g1081 540 SUPERFAMILY Cytochrome P450 47 382 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1081 Gso-Chr16 29320548 29325359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1081 50 505 Cytochrome P450 AT1G19630 41.215 2.37e-110 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1081 - - gsj:114390394 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0454 2 4796183 4796909 Gso16g1081 16 29320548 29325359 GST