Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1064 ATGAGACCACCGCACTATAAATATTCATGTCCACATGAGTGGGAAGGTAGCGTTGAGGAAAATAAAAAAGAGAAAGAAAATAATCAATACGACAACTTTGCAATTTTGGTGGTAGACCAAGGTAGGTCAATTGCCATGGACATTGGTGGTGAAGTGGAAGAGACCGTGAGAGAGTTGAGGCAATACTTCAAAACTGGAAAAACCAAGAGTGTGACATGGAGGAAAAACCAGCTCACAGCTCTCTTAGACCTTGTTCATGAGAATGAAGATGCTATATTTAAGGCCCTCCATCAAGATCTTGGGAAGCACCCTGTTGAGGCTTACCGTGATGAGGTTGGAGGGGTAGAAAAATCCGCCAGCAATGCTTTGAGCTGCGTTGAGAAATGGATGGCCCCTAAAAAGAGTGATATCCCTTTTCTTTTCTTCCCAGCTAAAGGAGAAGTGTTGTCAGAACCACTTGGTGTGGTTCTCATATTTTCTTCTTGGAACTTCCCAATCATACTGACATTGGATCCAATAATTGGGGCAATATCTGCTGGAAATGTTGTAGTCATAAAACCTTCAGAGCAATCTCCAGCAAGCTCTTCTTTTCTTGCCACTACCATTCCTCGCTACTTGGACTCTAATGCCATCAAGGTGATTGAGGGAGGACCAGATGTCTGTGAACAACTACTGCTACAAAAATGGGACAAAATATTCTTCACTGGAAGTCCACGTGTGGCAAGCGTAGTCATGTCTGCTGCTGCAAAGAATTTAACTCCCGTTACTCTAGAGTTGGGTGGAAAATGCCCTGCCATTCTTGATTCCCTTCCAAATCCTTTAGAGTTTAAGTTGGCAGTAAAAAGAATTGTAGGAGGAAAGTGGGGACCTTGCAGTGGTCAAGCTTGCATAGCAATAGACTATTTGCTTGTTGAGAAGAAGTTCTCATATGCTCTGATAGAATTACTAAAGAAGATCATTAGAAGATTTTATGGTGAAAATCCAGTGGAGTCAAAGGTAATTTCAAGAATATTAAACAAGCAGCACTTTGAAAGATTATGCAATCTTCTCAAAGACCCTCTTGTTGCGGCTTCCATCGTTCATGGTGGTTCAGTCGACGAAGAAAACTTGTTCATTGAGCCAACAATTTTGTTAGATCCTCCGTTAGATTCTCAGATAATGTCAGAAGAGATATTTGGCCCACTGCTTCCTATAATCACTATGGATAAAATTCAGGAAAGTATTGAATTTATCAATGCAAAGCCAAAACCTCTTGCCATCTATGCCTTCACCAAAGATGAAACTTTCAAGAGAAATATTCTATCAGAAACATCCTCAGGAAGTGTCGTATTTAACGACACAATGGTTCAATTTTTATGTGATACACTACCATTTGGAGGTGTTGGCCAGAGTGGTTTTGGAAGGTACCATGGGAAGTACTCTTTTGACACTTTCAGCCATGAAAAAGCTGTAATGCATAGAAAGCTGTTCCTTGAAATTGAGCCAAGGTACCCTCCTTGGAGTAAGTTCAAGCTCGAGTTTATCAGATTGGCATACAGGCTGAACTACTTTGGACTATTACTGCACATGCTGGGCTTGAAAAGATACAAGTAG 1593 0.4105 MRPPHYKYSCPHEWEGSVEENKKEKENNQYDNFAILVVDQGRSIAMDIGGEVEETVRELRQYFKTGKTKSVTWRKNQLTALLDLVHENEDAIFKALHQDLGKHPVEAYRDEVGGVEKSASNALSCVEKWMAPKKSDIPFLFFPAKGEVLSEPLGVVLIFSSWNFPIILTLDPIIGAISAGNVVVIKPSEQSPASSSFLATTIPRYLDSNAIKVIEGGPDVCEQLLLQKWDKIFFTGSPRVASVVMSAAAKNLTPVTLELGGKCPAILDSLPNPLEFKLAVKRIVGGKWGPCSGQACIAIDYLLVEKKFSYALIELLKKIIRRFYGENPVESKVISRILNKQHFERLCNLLKDPLVAASIVHGGSVDEENLFIEPTILLDPPLDSQIMSEEIFGPLLPIITMDKIQESIEFINAKPKPLAIYAFTKDETFKRNILSETSSGSVVFNDTMVQFLCDTLPFGGVGQSGFGRYHGKYSFDTFSHEKAVMHRKLFLEIEPRYPPWSKFKLEFIRLAYRLNYFGLLLHMLGLKRYK* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1064 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 60 482 IPR016162 GO:0016491
Gso16g1064 530 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 261 464 IPR016163 GO:0016620
Gso16g1064 530 PIRSF ALDH 20 525 IPR012394 GO:0006081
Gso16g1064 530 SUPERFAMILY ALDH-like 51 499 IPR016161 GO:0016491
Gso16g1064 530 Pfam Aldehyde dehydrogenase family 51 484 IPR015590 GO:0016491
Gso16g1064 530 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 3 MEMBER F1 53 528 - -
Gso16g1064 530 PANTHER ALDEHYDE DEHYDROGENASE 53 528 IPR012394 GO:0006081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1064 Gso-Chr16 28921450 28925507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1064 52 528 Aldehyde Dehydrogenase Gene Family AT4G36250 63.941 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1064 K00128 - gmx:100808513 1054.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0436 2 4576334 4581301 Gso16g1064 16 28921450 28925507 GST