Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1051 ATGCCAACCTTTCTCATCCTCGTGCTATTGTGCGCACGCTTCTTATCATGCGCCCAGTGCGGCTCCGTGACGGAGATCCAAGCCTTAACGTCGTTGAAGCTCAACCTCCATGACCCTCTTGGCGCACTCAACGGTTGGGATCCGTCAACTCCGTTAGCTCCGTGCGACTGGCGTGGAGTTTCATGCAAAAACGACCGAGTCACCGAGTTACGCTTGCCTCGCCTTCAACTCAGTGGCCAACTCGGTGACCGACTTTCAGACTTACGCATGCTCCGAAGGCTAAGCCTCCGTTCCAACTCCTTCAACGGCACCATTCCTCACTCGCTCTCCAAATGCACGCTCCTACGCGCCTTGTTCTTACAGTACAACTCGCTCTCTGGCCAACTTCCGCCGGAGATCGGAAACCTCGCCGGCCTCCAGATTCTCAATGTCGCCGGTAACAATCTCTCCGGCGAAATCTCCGGCGAACTTCCTCTCCGTCTTAAATACATCGACATTTCCGCGAATTCTTTCTCCGGCGAGATTCCGAGCACTGTGGCGGCTCTTTCCGAACTTCAGCTTATCAACTTTTCCTATAACAAATTCTCCGGCCTGATTCCGGCGCGTATAGGAGAGCTTCAGAATCTGCAATACCTTTGGCTCGATCATAACGTTCTTGGAGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTAAGCGTTGAAGGGAACGCGCTCGCCGGCGTGTTGCCGGCGGCAATTGCTGCTCTCCCTAACCTTCAGGTGCTGTCCCTCGCGCAGAACAATTTCACCGGGGCAATTCCCGCTTCCGTTTTCTGTAACGTCTCGCTCAAAACGCCGTCGCTCCGCATCGTTCAGTTAGAGTTTAATGGTTTCACCGACTTCGCGTGGCCTCAAGCCGCCACAACGTGTTTCAGCGTTCTCGAAGTTTTCAACATTCAGCGCAATCGCGTGGGCGGCAAGTTTCCGCTGTGGTTAACCAATGTCACCACGCTGTCCGTCCTCGATGTTTCCGGCAATGCGCTCTCCGGCAAAATTCCGCCGGAAATTGGACGCCTCGAGAAACTGGAGGAGTTGAAGATAGCCAACAATTCATTTTCCGGGGAGATTCCGCCGGAGATCGTGAAATGCAGGTCCCTGCGTGCTGTTGTTTTTGAAGGTAACAGGTTTTCCGGTGAGGTTCCTTCGTTTTTCGGTAGCCTTACACGGCTGAAGGTTCTGTCTCTTGGTGTGAACAATTTTTCTGGTTCTGTTCCAGTGAGTATTGGTGAGCTTGCGTCTCTTGAAACGTTGAGTTTAAGGGGTAATAGGTTGAATGGTACAATGCCAGAGGAGGTGATGTGGTTGAAGAATTTGACAATATTAGACCTCAGTGGAAACAAATTTTCGGGTCATGTTTCTGGTAAAATTGGGAACCTGAGTAAATTAATGGTTCTGAATCTGAGTGGCAATGGCTTCCACGGAGAAATTCCTTCTACTTTGGGGAATCTTTTCCGTCTCGCTACACTTGACTTGAGCAAACAAAATCTCTCTGGTGAATTGCCCTTTGAAATTTCAGGGCTTCCCAGTTTGCAAGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGACCAGTTTGAAACACGTGAACCTAAGCTCTAACGATTTTTCTGGGCATGTCCCCAAGAACTATGGCTTTCTTCGATCTATGGTTGTTCTTTCACTATCCCATAACCGCATCACAGGAATGATTCCCCCGGAAATTGGAAACTGCTCTGACATTGAAATTCTCGAGCTTGGATCAAATTACTTGGAGGGTCCAATTCCCAAAGATCTCTCTAGCCTTGCCCATTTGAAAATGCTTGATTTGGGTAAGAACAATTTAACTGGAGTTTTGCCTGAGGATATCTCCAAATGCTCATGGTTAACTGTTTTGTTAGCAGATCACAACCAACTCTCTGGTGCTATACCAGAGTCATTGGCAGAGTTATCATACCTAACAATACTGGATCTCTCTGCCAACAATTTGAGTGGGGAAATCCCAAGTAATCTGAACACAATCCCTGGTTTGGTTAACTTCAATGTCTCGGGTAACAACTTAGAAGGTGAGATTCCAGCGATGTTGGGTTCTAAATTCAACAACCCTTCTGTATTTGCAAACAACCAGAACCTATGTGGGAAGCCATTGGATAAAAAATGCGAAGAAACAGACAGTGGGGAGAGAAATAGGTTGATAGTGTTGATCATTATCATCGCAGTTGGAGGTTGCTTATTGGCACTATGTTGCTGCTTCTACATTTTCAGCTTACTAAGATGGCGCAGAAGGATCAAAGCGGCAGTGTCCGGGGAGAAGAAAAAGAGTCCAAGAACGAGTTCCGGAACAAGCCAGAGCCGTAGCAGCACCGACACAAACGGTCCAAAACTCGTCATGTTCAACACCAAGATCACTCTCGCGGAAACAATCGAAGCAACGAGGCAATTTGACGAAGAAAACGTGCTGAGCAGAACAAGACACGGGTTGGTATTCAAAGCCTGCTACAACGACGGAATGGTCTTTTCCATTCGCAAGCTCCAAGATGGGTCATTAGACGAAAACATGTTCAGAAAAGAAGCAGAGTCCTTGGGCAAAATCAGGCACCGAAATTTAACAGTTCTCAGAGGCTACTACGCTGGTTCACCAGATGTTAGACTCTTGGTATACGATTACATGCCCAATGGAAACCTCGCAACGTTGCTCCAAGAAGCTTCTCATTTAGATGGGCATGTTTTGAATTGGCCAATGCGACACCTCATTGCACTAGGAATTGCTCGCGGCATAGCGTTTTTGCACCAATCTTCACTTATCCACGGTGACATCAAACCCCAAAACGTGCTTTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGCTTGACAAGTTAACAGTTACCAACAACAACAACAACAACAATGCAGTTGAAGCCTCTACTTCAAGCACGGCTTCCGTTGGCACGTTGGGTTACGTGTCACCGGAAGCTACTTTAACCGGGGAAGCCACGAAGGAGTGTGACGTGTACAGCTTCGGCATCGTGTTGCTGGAGCTTCTAACCGGGAAGAGGCCCGTGATGTTCACACAGGACGAGGATATTGTTAAGTGGGTGAAGAAGCAGCTTCAGAAGGGGCAAATTACGGAGTTATTAGAGCCTGGTTTGTTTGAACTTGACCCAGAGTCTTCTGAATGGGAAGAGTTTCTGTTGGGTGTGAAAGTGGGCTTGCTTTGCACAGCACCGGATCCTCTTGATCGTCCAACCATGTCTGATATTGTGTTCATGCTCGAAGGTTGTCGTGTTGGACCCGATATTGCTTCCTCCGCTGATCCCACCACCCAACCTTCTCCTGTCTAA 3405 0.4828 MPTFLILVLLCARFLSCAQCGSVTEIQALTSLKLNLHDPLGALNGWDPSTPLAPCDWRGVSCKNDRVTELRLPRLQLSGQLGDRLSDLRMLRRLSLRSNSFNGTIPHSLSKCTLLRALFLQYNSLSGQLPPEIGNLAGLQILNVAGNNLSGEISGELPLRLKYIDISANSFSGEIPSTVAALSELQLINFSYNKFSGLIPARIGELQNLQYLWLDHNVLGGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLQVLSLAQNNFTGAIPASVFCNVSLKTPSLRIVQLEFNGFTDFAWPQAATTCFSVLEVFNIQRNRVGGKFPLWLTNVTTLSVLDVSGNALSGKIPPEIGRLEKLEELKIANNSFSGEIPPEIVKCRSLRAVVFEGNRFSGEVPSFFGSLTRLKVLSLGVNNFSGSVPVSIGELASLETLSLRGNRLNGTMPEEVMWLKNLTILDLSGNKFSGHVSGKIGNLSKLMVLNLSGNGFHGEIPSTLGNLFRLATLDLSKQNLSGELPFEISGLPSLQVIALQENKLSGVIPEGFSSLTSLKHVNLSSNDFSGHVPKNYGFLRSMVVLSLSHNRITGMIPPEIGNCSDIEILELGSNYLEGPIPKDLSSLAHLKMLDLGKNNLTGVLPEDISKCSWLTVLLADHNQLSGAIPESLAELSYLTILDLSANNLSGEIPSNLNTIPGLVNFNVSGNNLEGEIPAMLGSKFNNPSVFANNQNLCGKPLDKKCEETDSGERNRLIVLIIIIAVGGCLLALCCCFYIFSLLRWRRRIKAAVSGEKKKSPRTSSGTSQSRSSTDTNGPKLVMFNTKITLAETIEATRQFDEENVLSRTRHGLVFKACYNDGMVFSIRKLQDGSLDENMFRKEAESLGKIRHRNLTVLRGYYAGSPDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLIHGDIKPQNVLFDADFEAHLSDFGLDKLTVTNNNNNNNAVEASTSSTASVGTLGYVSPEATLTGEATKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQKGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMSDIVFMLEGCRVGPDIASSADPTTQPSPV* 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1051 1134 Gene3D Ribonuclease Inhibitor 21 158 IPR032675 -
Gso16g1051 1134 Gene3D Phosphorylase Kinase; domain 1 795 908 - -
Gso16g1051 1134 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Gso16g1051 1134 Gene3D Ribonuclease Inhibitor 472 747 IPR032675 -
Gso16g1051 1134 MobiDBLite consensus disorder prediction 791 813 - -
Gso16g1051 1134 SMART LRR_typ_2 357 381 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 88 112 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 525 548 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 477 501 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 429 453 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 573 597 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 206 230 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 254 278 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 669 693 IPR003591 -
Gso16g1051 1134 SMART LRR_typ_2 621 645 IPR003591 -
Gso16g1051 1134 SUPERFAMILY L domain-like 324 715 - -
Gso16g1051 1134 SUPERFAMILY Protein kinase-like (PK-like) 814 1119 IPR011009 -
Gso16g1051 1134 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1130 - -
Gso16g1051 1134 Gene3D Transferase(Phosphotransferase) domain 1 909 1123 - -
Gso16g1051 1134 SMART serkin_6 833 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1051 1134 Gene3D Ribonuclease Inhibitor 280 471 IPR032675 -
Gso16g1051 1134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 953 965 IPR008271 GO:0004672|GO:0006468
Gso16g1051 1134 SUPERFAMILY L domain-like 23 351 - -
Gso16g1051 1134 SMART LRR_sd22_2 453 479 - -
Gso16g1051 1134 SMART LRR_sd22_2 206 229 - -
Gso16g1051 1134 SMART LRR_sd22_2 429 444 - -
Gso16g1051 1134 SMART LRR_sd22_2 621 644 - -
Gso16g1051 1134 SMART LRR_sd22_2 254 281 - -
Gso16g1051 1134 SMART LRR_sd22_2 669 692 - -
Gso16g1051 1134 Pfam Leucine rich repeat 601 658 IPR001611 GO:0005515
Gso16g1051 1134 Pfam Leucine rich repeat 160 219 IPR001611 GO:0005515
Gso16g1051 1134 Pfam Leucine rich repeat 503 562 IPR001611 GO:0005515
Gso16g1051 1134 Pfam Leucine rich repeat 383 442 IPR001611 GO:0005515
Gso16g1051 1134 MobiDBLite consensus disorder prediction 787 813 - -
Gso16g1051 1134 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 4 1130 - -
Gso16g1051 1134 Pfam Protein kinase domain 844 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1051 1134 Gene3D Ribonuclease Inhibitor 159 279 IPR032675 -
Gso16g1051 1134 ProSiteProfiles Protein kinase domain profile. 833 1121 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1051 Gso-Chr16 28616879 28621182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1051 4 1134 Receptor kinase-like Gene Family AT4G36180 65.674 0.0 1437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Gso16g1051 Pkinase 8.5e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1051 - - gmx:100804785 2142.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0428 2 4487913 4491719 Gso16g1051 16 28616879 28621182 GST