Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g1049 | ATGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAGCTTGTGGGTTACTATCTGAGGAAGAAAGTTGCTTCTCAGAAGATTGATCTTGACGTTATCAAAGAGATCGACCTATATCGTATTGAACCATGGGATCTCCAAGAGACATACAGGATTGGGTACGAGGAGCAGAACGAGTGGTATTTCTTTAGCCACAAAGACAAGAAATATCCAACTGGGACAAGAACCAACAGAGCCACCATGGCAGGATTTTGGAAGGCGACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTCATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAACTGATTGGATCATGCACGAGTATAGGCTTGAAACTGTTGAGAATGGACCTCCACAGGAGGAAGGATGGGTGGTGTGCAGAGCATTCAAGAAAAGAACAACTAACGGCCAAACGAAGACTATTGAAGGATGGCATCGAAACTGCTTATACGATGAACAACAACAAGCATGTGGTAGTGTCAGCAGCACTGTGGTGGACCCTAATATTGACCTTATGTTAAGGCAACAACCTCAGAGGTTTTCAGGAGCTCAAAATTTCATGTACAAGCAAGAAGAGATCATAGAAGCAGATAATAATAATTTGAGCTTCATGCATGCAGAACAACAATTGGTGCAGCTTCCTCATCTAGAAAGTCCTTCTTTGCCACTAGCAAAGAAACAAAGCTCAGTAGTGTCCCCAATATCAGACAATATTAATAACAACGAAGATGATGATAATCCTCAAAAGGGTTTATCCAACACTACAAAGAAAGTGACCACTGATTGGAGAGCTCTTGACAAGTTCGTGGCTTCTCAGTTGAGCCAAGAAGAGAGGCATGAAATAGAAGGGGTGTCTAGCTTTGCAACTCATCACACTACTACTAGCTCGGACATGGCATTGCTGCTACTGCAGAATAATAGTAGGGAAAATGAAAGGAACAACAAGTTCAACCCGTTTTTCAATACAAGCTCAACAATATCAGACTGTGACATTGGGATATGCGTATTTGAAAAATGA | 1089 | 0.4261 | MMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIKEIDLYRIEPWDLQETYRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLETVENGPPQEEGWVVCRAFKKRTTNGQTKTIEGWHRNCLYDEQQQACGSVSSTVVDPNIDLMLRQQPQRFSGAQNFMYKQEEIIEADNNNLSFMHAEQQLVQLPHLESPSLPLAKKQSSVVSPISDNINNNEDDDNPQKGLSNTTKKVTTDWRALDKFVASQLSQEERHEIEGVSSFATHHTTTSSDMALLLLQNNSRENERNNKFNPFFNTSSTISDCDIGICVFEK* | 363 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g1049 | 362 | ProSiteProfiles | NAC domain profile. | 6 | 155 | IPR003441 | GO:0003677|GO:0006355 | |
Gso16g1049 | 362 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 76 | 4 | 336 | - | - | |
Gso16g1049 | 362 | SUPERFAMILY | NAC domain | 3 | 155 | IPR036093 | GO:0003677|GO:0006355 | |
Gso16g1049 | 362 | PANTHER | NAC DOMAIN-CONTAINING PROTEIN 82-RELATED | 4 | 336 | - | - | |
Gso16g1049 | 362 | MobiDBLite | consensus disorder prediction | 258 | 280 | - | - | |
Gso16g1049 | 362 | Gene3D | NAC domain | 15 | 159 | IPR036093 | GO:0003677|GO:0006355 | |
Gso16g1049 | 362 | Pfam | No apical meristem (NAM) protein | 7 | 134 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g1049 | Gso-Chr16 | 28568179 | 28572154 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g1049 | 2 | 361 | NAC Transcription Factor Family | AT2G18060 | 59.580 | 8.48e-141 | 402 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Gso16g1049 | NAM | 8.2e-38 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g1049 | - | - | gmx:100803726 | 733.406 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso2g0426 | 2 | 4460912 | 4464707 | Gso16g1049 | 16 | 28568179 | 28572154 | GST | |
Gso11g0636 | 11 | 5689965 | 5694837 | Gso16g1049 | 16 | 28568179 | 28572154 | PCT | |
Gso16g1049 | 16 | 28568179 | 28572154 | Gso11g0636 | 11 | 5689965 | 5694837 | PCT |