Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1044 ATGGCCATCAAAAAATCCAATAAGCTACCCCAAGCAGATGTGATCAAGCAAATTGTGAGAAGGTGTTCAAGTTTTGGGAAGAAGCAGCAGGGCTACAATGAAGAGGGTGGTCTTCCAGAAGATGTGCCAAAAGGGCACTTTGCAGTGTATGTTGGTGAAAACAGGACAAGATATATTGTCCCAATTTCATGGTTAGCTCATCCACAATTTCAAAGCTTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGACATGGGCCTTACCATCCCATGTGATGAAGTTGTTTTTGAGTTTCTTACCTCAATGATTAGATGA 321 0.4237 MAIKKSNKLPQADVIKQIVRRCSSFGKKQQGYNEEGGLPEDVPKGHFAVYVGENRTRYIVPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFEFLTSMIR* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1044 106 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 7 106 - -
Gso16g1044 106 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 7 106 IPR003676 GO:0009733
Gso16g1044 106 Pfam Auxin responsive protein 34 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1044 Gso-Chr16 28477597 28478322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1044 39 105 Calmodulin-binding Proteins AT3G43120 50.746 1.34e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1044 K14488 - gmx:100500218 220.705