Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g1035 | ATGGGAACCTGCTTTTCCGCCACCAAAGTCAGCGGCTCCCACGGCAACGCCGTCACCGTCAACAAGAACCGCAAGGGGGCCGCGAAGCCGAAATCAGAGACGGCAACGGCGAATCCCCTACGGCACAAGGCAAGTTCGCGCCACGTGCCGTGCGGGAAGCGCACCGATTTCGGTTACGAGAAGGATTTCGATCAGCGTTACTCGCTCGGAAAATTGCTCGGGCACGGCCAATTTGGTTACACTTACGTTGGAATCGACAAAGCCAATGGCGATCGCGTCGCCGTTAAGAGGCTTGAGAAGAGTAAGATGGTTCTGCCTATTGCCGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGCACTTACTGGCCATGAGAATGTGGTTCAGTTCTATAATGCTTTTGAAGATGGTTCTTATGTGTACATAGTTATGGAGTTGTGCGAGGGTGGAGAACTGCTAGATCGGATATTGGCCAAGAAGGACAGTCGTTATACTGAAAGAGACGCAGCGGTGGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGTCATTTACATGGTTTGGTACACCGGGACATGAAACCAGAGAATTTTCTTTTTAAATCAACCAAAGAAGATTCACCTTTAAAGGCCACTGATTTTGGTTTGTCAGATTTCATAAAACCTGGAAAAAAGTTTCATGATATTGTTGGCAGTGCTTACTATGTTGCACCTGAAGTGTTAAAACGTAAGTCTGGTCCTCAATCAGATGTGTGGAGTATTGGTGTTATTACATACATATTGTTGTGCGGAAGACGCCCATTTTGGGATAAGACTGAGGATGGTATCTTCAAGGAGGTCTTACGTAAGAAGCCCGATTTTCGTCGGAAACCATGGCCAACTATTAGTAATGCTGCAAAAGATTTTGTGAAAAAATTACTAGTAAAGGATCCTCGGGCGAGATTAACTGCTGCTCAAGCTTTATCACATCCATGGGTTAGAGAAGGAGGAGAAGCATTGGAGATTCCTATTGATATATCTGTCCTGAGCAACATGCGGCAGTTTGTGAAATATAGTCGATTCAAACAATTTGCACTGAGGGCATTGGCTAGCACACTTAATGAAGAAGAGTTGGCTGATATAAAAGATCAATTTGATGCTATAGATGTAGACAAAAATGGTTCGATTAGCCTGGAAGAGATGAGACAGATAGACAACAACACTGATGGTCTAGTGGATTTCCGGGAGTTTGTAGCGGCTACATTACACGTGCATCAATTGGAGGAAGACTCTGACAAGTGGCAGCAACTGTCACAGGCTGCTTTTGAGAAATTTGACCTAGATAAAGATGGCTATATTACTCCGGAAGAACTTAGAATGCATACATGCTTGAGAGGCTCCGTTGATCCTTTGCTAGAGGAAGCTGATATTGACAAAGATGGAAAAATAAGCCTACCAGAGTTTCGGAGACTTCTTAGAACTGCAAGCATGGGTTCTCAAAATGTTTCAAGCCCATCTGTTCATCGGCGGCAGAGGTTCTAG | 1524 | 0.4495 | MGTCFSATKVSGSHGNAVTVNKNRKGAAKPKSETATANPLRHKASSRHVPCGKRTDFGYEKDFDQRYSLGKLLGHGQFGYTYVGIDKANGDRVAVKRLEKSKMVLPIAVEDVKREVKILKALTGHENVVQFYNAFEDGSYVYIVMELCEGGELLDRILAKKDSRYTERDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSTKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRKKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSHPWVREGGEALEIPIDISVLSNMRQFVKYSRFKQFALRALASTLNEEELADIKDQFDAIDVDKNGSISLEEMRQIDNNTDGLVDFREFVAATLHVHQLEEDSDKWQQLSQAAFEKFDLDKDGYITPEELRMHTCLRGSVDPLLEEADIDKDGKISLPEFRRLLRTASMGSQNVSSPSVHRRQRF* | 508 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g1035 | 507 | Gene3D | - | 334 | 490 | - | - | |
Gso16g1035 | 507 | Gene3D | Transferase(Phosphotransferase) domain 1 | 153 | 333 | - | - | |
Gso16g1035 | 507 | SUPERFAMILY | EF-hand | 359 | 489 | IPR011992 | - | |
Gso16g1035 | 507 | Pfam | EF-hand domain pair | 434 | 486 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | PANTHER | CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE | 21 | 496 | - | - | |
Gso16g1035 | 507 | SMART | efh_1 | 431 | 457 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | SMART | efh_1 | 374 | 402 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | SMART | efh_1 | 461 | 489 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | ProSitePatterns | EF-hand calcium-binding domain. | 470 | 482 | IPR018247 | - | |
Gso16g1035 | 507 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 465 | 492 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | MobiDBLite | consensus disorder prediction | 24 | 47 | - | - | |
Gso16g1035 | 507 | ProSitePatterns | Protein kinases ATP-binding region signature. | 73 | 96 | IPR017441 | GO:0005524 | |
Gso16g1035 | 507 | ProSitePatterns | EF-hand calcium-binding domain. | 383 | 395 | IPR018247 | - | |
Gso16g1035 | 507 | SUPERFAMILY | Protein kinase-like (PK-like) | 65 | 342 | IPR011009 | - | |
Gso16g1035 | 507 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 189 | 201 | IPR008271 | GO:0004672|GO:0006468 | |
Gso16g1035 | 507 | Pfam | Protein kinase domain | 67 | 327 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g1035 | 507 | CDD | EFh | 433 | 487 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | ProSiteProfiles | Protein kinase domain profile. | 67 | 327 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g1035 | 507 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 427 | 462 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | Pfam | EF hand | 375 | 397 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | ProSiteProfiles | EF-hand calcium-binding domain profile. | 370 | 405 | IPR002048 | GO:0005509 | |
Gso16g1035 | 507 | CDD | STKc_CAMK | 66 | 326 | - | - | |
Gso16g1035 | 507 | Gene3D | Phosphorylase Kinase; domain 1 | 60 | 152 | - | - | |
Gso16g1035 | 507 | ProSitePatterns | EF-hand calcium-binding domain. | 440 | 452 | IPR018247 | - | |
Gso16g1035 | 507 | SMART | serkin_6 | 67 | 327 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g1035 | 507 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 21 | 496 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g1035 | Gso-Chr16 | 28217436 | 28231806 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g1035 | 1 | 499 | EF-hand Containing Proteins | AT2G17890 | 71.936 | 0.0 | 803 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_CDPK | Gso16g1035 | Pkinase | 7.1e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g1035 | K13412 | - | gmx:100798941 | 1005.74 |