Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1034 ATGGAGGTCGAGGTGCCAATCTCGCTTGATTTGAATAATCAACTTCAGCCAGAGACTGTAGTTTCAGTTCAAAATGGGGATCCTGGTGTTTCCTCTTCTGTTGCAAATGGTGTTAACCCGCAGCAGCCAGCTACAAAAAAACCGACCAGGCAGTGGGCTGCATGGACTCGACAAGAGGAGGAAAGTTTCTTCACCGCGTTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGACTTGTGAGACGGATGAACAAACTTCTTGGTCCAGGATTATGTTTGGATGCCAAAAACTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTAGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCCCGGAGATTTAAAATTTTTTTAGAAGCCTTGGAGCACCAATTATTGAAGGATCGGAAGAAGAATGTGAGGAAGCGACCCTTACAGGGGGGGAATTGTCTTCCTGCTGCACCTACCGCAGTCTCAAATCAAAGTAGAGCATCAGGAAATGATGCCCGTGCAGTTAAACTGGTACTTGTTGACAATCAAAATATTTTAAAATTGGGACCTTCTAAACCATCAACGAAGCGCACTGTAAACATGGGTGTTAACCATAGTAACACCAAGGGAGATTCAAATACCATGAAACCAACAAGGCAACGAAAGAAATCTGGTACGATTTCAACGGCTGCTTATAAAAAATGGGAGAAGGCTGCAATTGCTGGTGTTTCTTTAGTTGCAGATGCTGCTGAGCATTTGGAGCGAGCTGCAACTGTTAAAGAAATTGAACAAGACCAGGAGAATCCAGGAGAAAGATGTTCTGATCCCGCTGATTATGTCCTGGCCTCTTTAGCCAAATGTCCACAAAAGCAATTTGTTGATAACAATGTGAACAATAGTATGAAACTTAAGCTCCAGTTATTTCCAATTGATGAACCTACTCGAAGAGCATTGGAAATGGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCATCAATTTTAGAACATCTAAACCGTAAATGGGGTAATTCAAGCATAGCAGCTGGAGAAGTAATGCTTTTTCCTTATGGTATTCAAAGGGAAAATTTAGTTAATTATCCGAGATGGACCCAGGAATCTACTCTTAGTGCAGCTGATATATATGCAATGATTGGAAGTCCACCCATCTTCCGTTTAAGGTATGGTTGGTTCTCCAATACTGAGTTTGGGTTATTAAATATGCAAGTGCCTGAAGCATCTGGCTCCATGCTCAGACAATACAAAAGTAGTGTGGACAATGCTAAGGATCCGATTGTGAATTCAGTTTCATTTCCTACACCATTGACTAATACTCTTTCCATGGAGCTCTCTGAAGATTGCAGAACATCCATGAACAGAAACCATACTCTTATGACTGCTTCAACTGATTTGTCTAATGCTAGAGGAAACAATGTTTACCTGAATACAAGCACTGTGGAATCTCGTGATCCTACAGCCAATACACCATGGCATGGAAAAGATGTTAGGGATGGAGCTGTGACTACACAGTTGGAAGACATGGATGAGTTGAAATTAAGCAGTGGAGCAGGACTGTCAGCTGGAGAGTGGGCTGACAGCCTTACCAACATTAGTGTGGGGGACCTACTTTCAGGAGTGTCCCAGGATCTTGATAACTGCATCAATCCTCCTATTGCAGAGAGTTGTTATGATGTTCAGCAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCTAGACACCAAGACAGGATGGGACGATCCTCTCTGGCATCCCATATGTCTTCCATCTGGGATGCTGAAGAAACTTGTGATGCCTTTTTATTTAAAAAAGATCCTATTCTTCAAGAATATCGTCCTTGTTTATCTCCAGTTGCTTCTTTAGAGTCTGAGAAAAAGGTTACTAAAAGAAGCTTTGACAAATTGGATGAGCTGTCACCTGAAAGAGAGAGGCTTGTGGATGATTGTGCTCAAACAGACCCTATGCCTATGGACAGTTCCGAGTCTGATGCAGATGTCCAGGAGCATTTAGGAAAGGATTTTAGTGCGCTGGCAGATATGTATTGGCCTGATTCCTTGGGACCTTTGGATTTGGAAATACCATCATCAACTAAATACCATAGCGAAGATCTAATTTTTAGTGATAGTCTTAGTGGACTGAATCGCTTGATAGCCAGCAGCCTGGATGCATTCCAGAATTGCTCCTTTTTTGGGTTTGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCCACTCTTTCAGATTTTAAAATTGGAAGTGGCATCTGA 2397 0.4193 MEVEVPISLDLNNQLQPETVVSVQNGDPGVSSSVANGVNPQQPATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPAAPTAVSNQSRASGNDARAVKLVLVDNQNILKLGPSKPSTKRTVNMGVNHSNTKGDSNTMKPTRQRKKSGTISTAAYKKWEKAAIAGVSLVADAAEHLERAATVKEIEQDQENPGERCSDPADYVLASLAKCPQKQFVDNNVNNSMKLKLQLFPIDEPTRRALEMDKHNPHLELTLSTRKKISSILEHLNRKWGNSSIAAGEVMLFPYGIQRENLVNYPRWTQESTLSAADIYAMIGSPPIFRLRYGWFSNTEFGLLNMQVPEASGSMLRQYKSSVDNAKDPIVNSVSFPTPLTNTLSMELSEDCRTSMNRNHTLMTASTDLSNARGNNVYLNTSTVESRDPTANTPWHGKDVRDGAVTTQLEDMDELKLSSGAGLSAGEWADSLTNISVGDLLSGVSQDLDNCINPPIAESCYDVQQIPFSSDSFDAAIAAHISRHQDRMGRSSLASHMSSIWDAEETCDAFLFKKDPILQEYRPCLSPVASLESEKKVTKRSFDKLDELSPERERLVDDCAQTDPMPMDSSESDADVQEHLGKDFSALADMYWPDSLGPLDLEIPSSTKYHSEDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKEAPSTVEARESATLSDFKIGSGI* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1034 798 MobiDBLite consensus disorder prediction 24 50 - -
Gso16g1034 798 Gene3D - 10 104 - -
Gso16g1034 798 PANTHER CRAMPED PROTEIN 22 774 - -
Gso16g1034 798 MobiDBLite consensus disorder prediction 164 190 - -
Gso16g1034 798 SMART sant 51 99 IPR001005 -
Gso16g1034 798 PANTHER PROTEIN CRAMPED-LIKE 22 774 - -
Gso16g1034 798 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Gso16g1034 798 SUPERFAMILY Homeodomain-like 47 101 IPR009057 -
Gso16g1034 798 CDD SANT 54 97 IPR001005 -
Gso16g1034 798 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
Gso16g1034 798 MobiDBLite consensus disorder prediction 210 248 - -
Gso16g1034 798 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1034 Gso-Chr16 28193587 28199844 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gso16g1034 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1034 - - gmx:100798411 1586.24