Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1031 ATGGGGACGGGGGAGGAATGTGGAGTTGGGGGCAATGGTGGAATGCGAAGTTGGGAGAGGGAGAAGAAGAAGAAGAAGCATAGTGGTCGAGTTAATGAATTCAAAGATGATATTGAGAAGCTACAGAAATGGAGGTTGGCTTTGCGTCAGACAGCTGATTTCTCTGGTTGGCATTACAAACGAGGAGAATATGAGCGTGAGATCATTAGAGAAATCACAGATAACATCTCCCATAAGCTTGATCTCTTGATTCTAGATGACGTTGACACACACGAGCAATTACAAGCAATTGCTGCAAGACCTGATTGGTTTGGTCCCGGTAGCAAAATCATCATCACAACTCGGGACAAACAATTGCTAACATCTCATGAAGTTAATAAAACTTATGAGGTGAAGAAATTGGATGTGGACGATGCTCTTCAGTTGCTTACATGGAAAGCTTTTAAGAAGGAAAAAGCTTATCCAACTTATGTGGAGGTCTTGCATGATGCAGTGACTTATGCTTTTGGTCTTCCATTGGCGTTGGAAGTAATAGGTTCCCACTTGAATGGAAAAAGTATAGAAGGATGGGAATCTGCCATCAAACAATATAAAAGAATTCCCAAGAAGAAAATTCTAGATATACTTAAAGTAAGCTTTGATGCTTTGGAAGAAGAAGAGAAATTTTTTTTTCTTGACATTACTTGTTGCTTCAAAGGATGGAGATTGACAGAGGTTGAACATATAATTCGTGATCGTTATGATGACGGCATGAAACATCATATTGGGGTGTTGGTTGAAAAATCTCTCATAGAGGTTAGTTGGTGGGATGGTGTAGTTAACATGCATGACTTGAGTCAGGACATGGCATGGGCGGTTTCAAGGCCCGGCTATCCTGGGCAATTGCCCAGGCTCTGGCCCAAATTCATTTGA 912 0.4134 MGTGEECGVGGNGGMRSWEREKKKKKHSGRVNEFKDDIEKLQKWRLALRQTADFSGWHYKRGEYEREIIREITDNISHKLDLLILDDVDTHEQLQAIAARPDWFGPGSKIIITTRDKQLLTSHEVNKTYEVKKLDVDDALQLLTWKAFKKEKAYPTYVEVLHDAVTYAFGLPLALEVIGSHLNGKSIEGWESAIKQYKRIPKKKILDILKVSFDALEEEEKFFFLDITCCFKGWRLTEVEHIIRDRYDDGMKHHIGVLVEKSLIEVSWWDGVVNMHDLSQDMAWAVSRPGYPGQLPRLWPKFI* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1031 303 Gene3D - 23 131 IPR027417 -
Gso16g1031 303 Pfam NB-ARC domain 66 200 IPR002182 GO:0043531
Gso16g1031 303 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 82 299 IPR044974 GO:0006952
Gso16g1031 303 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 227 IPR027417 -
Gso16g1031 303 SUPERFAMILY "Winged helix" DNA-binding domain 203 289 IPR036390 -
Gso16g1031 303 MobiDBLite consensus disorder prediction 1 27 - -
Gso16g1031 303 PRINTS Disease resistance protein signature 75 89 - -
Gso16g1031 303 PRINTS Disease resistance protein signature 168 182 - -
Gso16g1031 303 Gene3D - 133 217 IPR042197 -
Gso16g1031 303 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 82 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1031 Gso-Chr16 28167673 28169304 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1031 72 286 WRKY Transcription Factor Family AT5G45050 36.697 3.83e-31 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1031 - - gsj:114389930 610.912