Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1010 ATGGGTTCTATTGGAATTGAGAGCTCGGGACCCGAGGTTGTCACAGTTGATGTACATGCAACCAAGGATCTGATCCAGACCAGTCATGTTTATCTGGATGTCAGGACGGTGGAAGAGTTCCAGAAAGGACATGTGGATGCAGAGAAGATCATTAACATTCCGTACATGTTTAATACACCGGAAGGCAGAGTGAAGAATCCAGAATTTCTTAAGGAGGTTTCATCTGCTTGTAAGAAAGAAGATCACATCATCGTGGGTTGTCAAAGTGGAGTGAGATCTCTATATGCAACTGCGGATCTTCTGACCGAAGGATTTAAGGATGTGAGCAACATGGGAGGAGGATATATGGACTGGGTTAAAAAAGAATTTCCAGTGAAAGCACCTTTGGAGTTGGTTAAAAACGAAGTGCCAGTGAAAACACCTTTGGAGTTGGTTAAAAATGAATTTCCAGTGAACCCACCTATAGTTGGTTAA 474 0.4262 MGSIGIESSGPEVVTVDVHATKDLIQTSHVYLDVRTVEEFQKGHVDAEKIINIPYMFNTPEGRVKNPEFLKEVSSACKKEDHIIVGCQSGVRSLYATADLLTEGFKDVSNMGGGYMDWVKKEFPVKAPLELVKNEVPVKTPLELVKNEFPVNPPIVG* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1010 157 CDD RHOD 20 119 - -
Gso16g1010 157 Gene3D - 7 127 IPR036873 -
Gso16g1010 157 Pfam Rhodanese-like domain 22 120 IPR001763 -
Gso16g1010 157 SMART rhod_4 16 124 IPR001763 -
Gso16g1010 157 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 13 125 IPR036873 -
Gso16g1010 157 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 IPR044684 GO:0003824
Gso16g1010 157 PANTHER THIOSULFATE SULFURTRANSFERASE 18 11 129 - -
Gso16g1010 157 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1010 Gso-Chr16 27811380 27813290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1010 3 125 Sulfurtransferasese or Rhodanese AT5G66170 56.911 3.50e-50 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1010 - K15692 gmx:100792251 320.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0399 2 4245513 4247522 Gso16g1010 16 27811380 27813290 GST
Gso1g1417 1 50798308 50800089 Gso16g1010 16 27811380 27813290 PCT
Gso11g0657 11 5908204 5909851 Gso16g1010 16 27811380 27813290 PCT
Gso1g1382 1 50480012 50482452 Gso16g1010 16 27811380 27813290 PCT
Gso16g1010 16 27811380 27813290 Gso1g1417 1 50798308 50800089 PCT
Gso16g1010 16 27811380 27813290 Gso11g0657 11 5908204 5909851 PCT