Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0990 ATGAATTTACTCTATCAAAAAAAGCTCCTTTCTCGATGGCTTATAGCCATTCTTTGGTGTTCTATTATAGCCCCCATCTTTCAACATGTTTCTGTTATGAGCCTACCAAACAATGAGACTGTGCCAGCGGTGATGGTATTTGGGGACTCTATAGTAGATCCGGGAAACAACAACTATATCACCACACTTGTCAAATGCAATTTCCCACCATATGGTAGAGATTTTGGTGAAGGAAATCAACCAACTGGGAGGTTCAGCAATGGCTTAGTTCCATCAGACATAATTGCTGCAAAACTTGGAGTCAAGAAGCTTTTACCTGCTTATCTTGACCCAAATTTGCAACTTCAAGATCTCCTCACTGGTGTAAGCTTTGCCTCAGGCGGTGCCGGATATGATCCTCTAACAGCTGAATTAGTGAATGTGATGTCATTGTCAGATCAATTAGACATGTTCAAGGAATACATAAAGAAGATAAATGAAGCGGTTGGAAGAAACAGAACGACAATGATAGTATCTAAGAGCATATACATAGTATGTGTAGGAAGTGATGACATTGCCAATACTTATTATCAATCACCTTTTAGGAGTGCTGAGTATGATATTCCTTCATACACGGACTTCATGGCTTCAGAAGCCTCAAAATTCTTGCAGGAACTTTATGGACTAGGAGCTAGAAGAATTGGAGTATTTGGTTTATCAGTTATAGGGTGTGTGCCCTCACAAAGAACACTCGGTGGAGGCTTGAATAGAGCATGCTTAGATTCTTCTAACCAAGCAGCAATGCTCTTCAACTCGAAGCTCAACTCCCAGATGGTTGTGCTTGGAAAAAAGTTTTCAGACTCTAGGCTTGTTTATCTTGATTCTTACAACGGATTTCTTAACATGCTTCAAAATCCTGCTAAATTTGGTTTCGAAGTGATAAAGAAAGGATGCTGTGGCACGGGGGATATAGAAGTGAGCATTTTGTGCAACCGTTACAGCATAAACACATGCTCTAACACCACTCACTACTTGTTCTGGGACAGTTATCATCCTACACAGGAGGCTTATCTTGCCCTTAGTTCTCTAGTGTTTGATAACAAAATTAAGGACTTCTTCTGA 1101 0.4024 MNLLYQKKLLSRWLIAILWCSIIAPIFQHVSVMSLPNNETVPAVMVFGDSIVDPGNNNYITTLVKCNFPPYGRDFGEGNQPTGRFSNGLVPSDIIAAKLGVKKLLPAYLDPNLQLQDLLTGVSFASGGAGYDPLTAELVNVMSLSDQLDMFKEYIKKINEAVGRNRTTMIVSKSIYIVCVGSDDIANTYYQSPFRSAEYDIPSYTDFMASEASKFLQELYGLGARRIGVFGLSVIGCVPSQRTLGGGLNRACLDSSNQAAMLFNSKLNSQMVVLGKKFSDSRLVYLDSYNGFLNMLQNPAKFGFEVIKKGCCGTGDIEVSILCNRYSINTCSNTTHYLFWDSYHPTQEAYLALSSLVFDNKIKDFF* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0990 366 Pfam GDSL-like Lipase/Acylhydrolase 44 356 IPR001087 GO:0016788
Gso16g0990 366 Gene3D SGNH hydrolase 29 361 IPR036514 -
Gso16g0990 366 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 365 - -
Gso16g0990 366 PANTHER GDSL ESTERASE/LIPASE EXL3 3 365 - -
Gso16g0990 366 CDD SGNH_plant_lipase_like 42 360 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0990 Gso-Chr16 27403355 27405864 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0990 21 361 Pollen Coat Proteome AT1G75910 38.261 1.47e-74 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0990 - - gmx:100799299 738.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0390 2 4154215 4156977 Gso16g0990 16 27403355 27405864 GST
Gso11g0674 11 6010148 6012981 Gso16g0990 16 27403355 27405864 PCT
Gso16g0990 16 27403355 27405864 Gso11g0674 11 6010148 6012981 PCT