Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0963 ATGGTGATCACAATTTTTCTTCTCGTGTTGGCCATTCCTTCTCCCCTTATCAAAACAGCCGAATCACTAAGTTTCAACATAACAAACTTCCACGGGGCCAAAAGCATGGCATACGAGGGTGATGGCAAAGTAAACAAAAACGGGTCCATAGAGCTAAACATAGTGACCTATCTTTTCCGGGTTGGAAGAGCCTTTTACAAACAACCTCTGCACCTGTGGGACTCATCTTCTGGTGTTGTAAACGACTTCTCCACACGCTTCACTTTCACTATTGCCAGAGCCACCAACGACACCATTGGTGATGGTTTCGCCTTCTACTTAGCCCCTCGTGGCTACCGGATTCCTCCGAACGCAGCCGGTGGAACTTTAGGCCTCTTCAACGCCACCACCAATGCATATATTCCCCATAACCATGTGTTTGCGGTTGAGTTTGACACATTTAATAGCACAATTGACCCTCCCTTTCAGCACGTTGGCGTAGATGATAACTCTCTCAAATCCGTGGCTGCTGCTGAGTTTGACATTGACAAAAACCTCGGAAACAAATGTAACGCTTTGATAAACTATACTGCTTCCAGCAAGATCCTCTTTGTGTCTTGGTCCTTTAACAATTCCAATTCCACTAATTCTTCCCTTTCTTACAAGATTGACCTCATGGACATTCTACCTGAGTGGGTGGATGTTGGCTTCTCCGCTGCCACTGGACAATATACCCAACGGAACGTTATTCACTCGTGGGAATTCAGTTCATCCACTGCTTCAAAAAACCACAATAATGTTCTGCTGGTTGTTGTGGTAACCTGTTCAACAGTCTTGGTGGTCGTGGTCGTTGTCGTGAGTGTTGCAGCTTGGGTAATGATCACAAAAAAGAGAAAGGGTAAGGTAGACAATGATAATAATGGTGAACGTGGAGCCACCCCGGTTAAGTTTGATTTGGATAGGGCAACTTTACCTAGAAGATTTGATTACAAAGAACTAGTTGTAGCTACCAAAGGGTTCGCGGATGATGCAAGGCTTGGACGAGGTAGCTCGGGACAGGTTTACAAAGGGGTTCTGAGTGATTTAGGAAGGGTTATTGCTGTGAAAAGGATTTTCACTAGCTTTGAAAATTCAGAGAGAGTTTTCATCAATGAAGTTAGGATCATAAGCCGTCTTATACACAGAAACCTGGTGCAGTTCATCGGGTGGTGCCACGAGCAAGGGGAGTTTCTGTTGGTTTTTGAGTTCATGCCTAATGGAAGCCTCGACACCCATCTCTTCGGGGAGAAAAAAACTTTGGCCTGGGATATTAGGTACAAGGTAGCACTAGGGGTGGTTTTGGCCCTTCGTTATCTTCATGAGGATGCAGAGCAAAGTGTTCTTCATAGGGATATTAAGTCAGCTAATGTGTTATTGGACATGGATTTTAGCACCAAGCTTGGCGATTTTGGGATGGCAAAGTTGGTGGATCCAAGGTTGAGAACTCAGAGGACAGGGGTAGTGGGGACTTATGGGTACCTTGCACCAGAATATATCAATGGAGGTAGGGCAAGCAAGGAATCAGACATTTATAGCTTTGGGGTTGTGGCTCTTGAAATTGCATGTGGGAGAAGGATTTATCAAGACGGGGAGTTTCATGTACCTCTCGTGAATTGGGTGTGGCAATTATATGTGGAAGGGAATGTTCTAGGTGCTGTTGATGAGAGATTGAACAATGAGTTTGAGGTGGATGAAATAACAAGATTGATTGTTATGGGGTTGTGGTGTACTAACCCAAACGACAAAGAAAGGCCCAAGGCTGCACAAGTAATAAAAGTTCTTCAGCTTGAAGCGCCATTGCCTGTGCTTCCGCTTGATATGCATAACGCTTATCCTCCTTCTCTAGTTACCCATGGGCAACCCACCTACAATTCCTCATGTTCAGTACCCTTCACTAATAGCTTCGTCAGTGTTGGACGCTAA 1941 0.4493 MVITIFLLVLAIPSPLIKTAESLSFNITNFHGAKSMAYEGDGKVNKNGSIELNIVTYLFRVGRAFYKQPLHLWDSSSGVVNDFSTRFTFTIARATNDTIGDGFAFYLAPRGYRIPPNAAGGTLGLFNATTNAYIPHNHVFAVEFDTFNSTIDPPFQHVGVDDNSLKSVAAAEFDIDKNLGNKCNALINYTASSKILFVSWSFNNSNSTNSSLSYKIDLMDILPEWVDVGFSAATGQYTQRNVIHSWEFSSSTASKNHNNVLLVVVVTCSTVLVVVVVVVSVAAWVMITKKRKGKVDNDNNGERGATPVKFDLDRATLPRRFDYKELVVATKGFADDARLGRGSSGQVYKGVLSDLGRVIAVKRIFTSFENSERVFINEVRIISRLIHRNLVQFIGWCHEQGEFLLVFEFMPNGSLDTHLFGEKKTLAWDIRYKVALGVVLALRYLHEDAEQSVLHRDIKSANVLLDMDFSTKLGDFGMAKLVDPRLRTQRTGVVGTYGYLAPEYINGGRASKESDIYSFGVVALEIACGRRIYQDGEFHVPLVNWVWQLYVEGNVLGAVDERLNNEFEVDEITRLIVMGLWCTNPNDKERPKAAQVIKVLQLEAPLPVLPLDMHNAYPPSLVTHGQPTYNSSCSVPFTNSFVSVGR* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0963 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Gso16g0963 646 ProSitePatterns Legume lectins alpha-chain signature. 222 231 IPR000985 -
Gso16g0963 646 ProSitePatterns Protein kinases ATP-binding region signature. 339 362 IPR017441 GO:0005524
Gso16g0963 646 PANTHER - 22 615 - -
Gso16g0963 646 PANTHER LECTIN RECEPTOR KINASE 22 615 - -
Gso16g0963 646 SMART serkin_6 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0963 646 CDD lectin_legume_LecRK_Arcelin_ConA 23 251 IPR001220 GO:0030246
Gso16g0963 646 SUPERFAMILY Protein kinase-like (PK-like) 317 635 IPR011009 -
Gso16g0963 646 ProSiteProfiles Protein kinase domain profile. 333 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0963 646 Gene3D Transferase(Phosphotransferase) domain 1 410 605 - -
Gso16g0963 646 Pfam Protein kinase domain 335 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0963 646 Pfam Legume lectin domain 22 258 IPR001220 GO:0030246
Gso16g0963 646 Gene3D - 20 265 - -
Gso16g0963 646 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 264 IPR013320 -
Gso16g0963 646 Gene3D Phosphorylase Kinase; domain 1 318 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0963 Gso-Chr16 26797473 26800222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0963 3 613 Receptor kinase-like Gene Family AT5G10530 43.720 3.28e-166 488
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso16g0963 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0963 - - gmx:100784490 1237.63