Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0956 ATGGCTCATCTGAGCCACAAGACCTTGGTTTATCTTCCAGAAATGAGGCCTGAACATGAAGCTGAGGAAGGCCAACCCAGAAAAAGTCTTGGTTCTTTTTCTTCTTGGCCTCATCGTTTGGAGAATGTTTTCCCCGTTTATGCCATGGGAACTTCCAACCCTGCAGTCTTGGATTCTTCACTTCACACTTCTGATTGTCTTGATCCTATTTGGGATGCTGTCAGAGAAGAAGCCAAGTTAGAGGCAGAAAAGGAGCCAATTTTGAGTAGCTTCTTCTATGCCACTATTCTGTCTCATGATTGCTTGGAGCAAGCATTGGCTTTTGCTCTTGCCAACCGACTCCAAAACCCTACTCTTTTGGCAACTCAGCTGATGGATATATTTTCTAATGTGATGAAGCATGATAAAGGTATCCAGCAATCCATTCGCTTGGATATTCAGGCATTTAAAGATCGGGATCCTGCTTGTTTGTCATATTGCTCAGCACTTTTATATATGAAGGGCTACCAGTCTTTGCAAGTATATCGAGTAGCTCATGCTTTGTGGGGCCAGGGACGCAAAGTTTTGGCCTCAGCTTTGCAAAGTCGAGTTAGTGAGGTTTTTGGAGTTGATATACATCCAGCTGCAAAAATTGGGGATGGAATTTTAGTAGATCATGGGACAGGTGTTGTTATTGGTGAAACAGTTGTTGTTGGAAACAGAGTTTCATTGATGCAAGGTGTAACTTTTGGCGGCACGGGTAAGGAAACAGGTGATCGGCATCCCAAAATTTCTGAAGGTGTTCTAATTGGAGCACATGCAACTATACTTGGGAATATAACAATTGGTGAATGTGTGATGATAGCTGCTGGCTCCCTTGTGTTACAAGAGGTTCCTCCTCACAGCATTGTGGCTGGTGTACCAGCAAAGGTTATTGGAAGAGTACATGAGCATTATCCATCCTTAACCATGCAGCAAGATGAAAATAAGCATCTATCGGAGGAGTTTTTCTATAGCAAAGATGAAACCACAGAAAATTACTACATAAATTGA 1032 0.4254 MAHLSHKTLVYLPEMRPEHEAEEGQPRKSLGSFSSWPHRLENVFPVYAMGTSNPAVLDSSLHTSDCLDPIWDAVREEAKLEAEKEPILSSFFYATILSHDCLEQALAFALANRLQNPTLLATQLMDIFSNVMKHDKGIQQSIRLDIQAFKDRDPACLSYCSALLYMKGYQSLQVYRVAHALWGQGRKVLASALQSRVSEVFGVDIHPAAKIGDGILVDHGTGVVIGETVVVGNRVSLMQGVTFGGTGKETGDRHPKISEGVLIGAHATILGNITIGECVMIAAGSLVLQEVPPHSIVAGVPAKVIGRVHEHYPSLTMQQDENKHLSEEFFYSKDETTENYYIN* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0956 343 Gene3D serine acetyltransferase, domain 1 54 203 IPR042122 -
Gso16g0956 343 SUPERFAMILY Trimeric LpxA-like enzymes 69 318 IPR011004 -
Gso16g0956 343 CDD LbH_SAT 201 301 IPR045304 -
Gso16g0956 343 Pfam Bacterial transferase hexapeptide (six repeats) 254 287 IPR001451 -
Gso16g0956 343 PANTHER SERINE ACETYLTRANSFERASE 6 333 - -
Gso16g0956 343 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 263 291 IPR018357 GO:0016740
Gso16g0956 343 PANTHER SERINE ACETYLTRANSFERASE 2-RELATED 6 333 - -
Gso16g0956 343 SMART SATase_N_2_a 70 174 IPR010493 GO:0005737|GO:0006535|GO:0009001
Gso16g0956 343 TIGRFAM cysE: serine O-acetyltransferase 142 303 IPR005881 GO:0005737|GO:0006535|GO:0009001
Gso16g0956 343 Gene3D Hexapeptide repeat proteins 204 334 - -
Gso16g0956 343 Pfam Serine acetyltransferase, N-terminal 70 173 IPR010493 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0956 Gso-Chr16 26501157 26504944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0956 40 330 Miscellaneous Gene Families AT2G17640 70.447 3.18e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0956 K00640 - gmx:100778586 679.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g0355 2 3882187 3886577 Gso16g0956 16 26501157 26504944 GST
Gso1g1369 1 50378225 50382140 Gso16g0956 16 26501157 26504944 PCT
Gso11g0715 11 6360783 6365800 Gso16g0956 16 26501157 26504944 PCT
Gso16g0956 16 26501157 26504944 Gso1g0122 1 1350205 1353469 PCT
Gso16g0956 16 26501157 26504944 Gso9g1724 9 41682424 41684547 PCT