Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0951 | ATGGGTGTCTGCTTCTCCTCTGGCCCGACACAGCACTCTTCTTCCCTCGATCGACCTCACTATTCAGGTTCAGCAAGCACTAACTGCAAAAACGTGGGAATCACCAAAACCACGAGCAGCAGCACCGAAAATAGACAGTTTACCGTGATTGCCAGTGGAAGCATCGACGACGAAGAATCTATTCATTATCTTCTTCGTCGTGTATATCATCGTCCCCTTCGTCTTCCTCTTCCTCCACCGGATGGCCAGATTCTGAAATGGCCAAACTTGAAGGTTTTCGATTTTGAGGAGTTGAAATCTGCCACAAACAATTTCAGGTCTGACACATTGCTGGGTGAAGGTGGCTTTGGCAGAGTTTACAAGGGATGGTTGGATGAGGATACCCTCGCCCCTACCAAAGCAGGCTGCGGAATGGTCGTTGCCATAAAATGGTTGAACCCCGAAAGCACGCAAGGGTTTGACCAGTGGCAGACAGAACTAAACATTATGAGAAGGTTTTCTCACCCCAACCTGGTCAATTTATTGGGTTACTGTTGGGACGATGATGAGCATCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTAGACAATCATCTATTCAAAAGAAATCGTAACTTAGAATTACTTTCTTGGAACACACGGCTTAAAATAGCTATTGGTGTAGCTCGGGGATTAGCTTTCTTGCATGCTTCTGAAAACAACGTCATTCACAGAGATTTCAAGTCCTCAAATATACTACTTGATGGAAATTACAATCCAAAGATCTCAGATTTTGGCTTGGCAACATTGGGGTCTTCTGAGGGACAATCCCACAATTACAATCCAGAGATCTCAGATTTTGGCTTGGCGAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTACCAGGGTCATGGGCACGTATGGTTATGCAGCTCCAGAATACATAGCAACAGGCCACTTGTATGTGAAGAGTGATGTCTATGGATTTGGTGTAGTGCTGCTTGAAATACTTACAGGCATGCGGGCACTTGACACAAATCGGCCAACAGGGCAGCAGAACCTAGTTGAATGGACCAAGCCTCTTCTCTCTTCCAAGAAAAAGTTGAAAACAATAATGGATGCTAAGATAGTGGGTCAATATTCACTTCAGGCAGCATGGCAAGCAGCACAACTTACTATGAAATGCCTACAATCTATCCCTGAAGAACGTCCTTCTATGAAAGATGTAGTTGAGGCATTGGAAGCCATTGAAGCTATCCAAAATTAG | 1254 | 0.4482 | MGVCFSSGPTQHSSSLDRPHYSGSASTNCKNVGITKTTSSSTENRQFTVIASGSIDDEESIHYLLRRVYHRPLRLPLPPPDGQILKWPNLKVFDFEELKSATNNFRSDTLLGEGGFGRVYKGWLDEDTLAPTKAGCGMVVAIKWLNPESTQGFDQWQTELNIMRRFSHPNLVNLLGYCWDDDEHLLVYEFMPKGSLDNHLFKRNRNLELLSWNTRLKIAIGVARGLAFLHASENNVIHRDFKSSNILLDGNYNPKISDFGLATLGSSEGQSHNYNPEISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRALDTNRPTGQQNLVEWTKPLLSSKKKLKTIMDAKIVGQYSLQAAWQAAQLTMKCLQSIPEERPSMKDVVEALEAIEAIQN* | 418 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0951 | 417 | ProSitePatterns | Protein kinases ATP-binding region signature. | 111 | 143 | IPR017441 | GO:0005524 | |
Gso16g0951 | 417 | PANTHER | SERINE/THREONINE-KINASE CX32, RELATED PROTEIN | 272 | 415 | - | - | |
Gso16g0951 | 417 | PANTHER | SERINE/THREONINE-KINASE CX32, RELATED PROTEIN | 77 | 272 | - | - | |
Gso16g0951 | 417 | Gene3D | Phosphorylase Kinase; domain 1 | 89 | 190 | - | - | |
Gso16g0951 | 417 | PANTHER | OS01G0588500 PROTEIN-RELATED | 77 | 272 | - | - | |
Gso16g0951 | 417 | PANTHER | OS01G0588500 PROTEIN-RELATED | 272 | 415 | - | - | |
Gso16g0951 | 417 | ProSiteProfiles | Protein kinase domain profile. | 105 | 412 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0951 | 417 | SUPERFAMILY | Protein kinase-like (PK-like) | 84 | 411 | IPR011009 | - | |
Gso16g0951 | 417 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 236 | 248 | IPR008271 | GO:0004672|GO:0006468 | |
Gso16g0951 | 417 | Gene3D | Transferase(Phosphotransferase) domain 1 | 191 | 272 | - | - | |
Gso16g0951 | 417 | Pfam | Protein kinase domain | 275 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0951 | 417 | Coils | Coil | 405 | 417 | - | - | |
Gso16g0951 | 417 | Pfam | Protein tyrosine and serine/threonine kinase | 109 | 266 | IPR001245 | GO:0004672|GO:0006468 | |
Gso16g0951 | 417 | Gene3D | Transferase(Phosphotransferase) domain 1 | 273 | 417 | - | - | |
Gso16g0951 | 417 | CDD | STKc_IRAK | 111 | 412 | - | - | |
Gso16g0951 | 417 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0951 | Gso-Chr16 | 26311784 | 26315209 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0951 | 91 | 409 | Glycoside Hydrolase | AT3G07070 | 45.938 | 3.60e-93 | 285 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CR4L | Gso16g0951 | PK_Tyr_Ser-Thr | 1.8e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0951 | - | - | gmx:100820454 | 772.696 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso11g0724 | 11 | 6463413 | 6468284 | Gso16g0951 | 16 | 26311784 | 26315209 | PCT | |
Gso16g0951 | 16 | 26311784 | 26315209 | Gso11g0724 | 11 | 6463413 | 6468284 | PCT |