Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0951 ATGGGTGTCTGCTTCTCCTCTGGCCCGACACAGCACTCTTCTTCCCTCGATCGACCTCACTATTCAGGTTCAGCAAGCACTAACTGCAAAAACGTGGGAATCACCAAAACCACGAGCAGCAGCACCGAAAATAGACAGTTTACCGTGATTGCCAGTGGAAGCATCGACGACGAAGAATCTATTCATTATCTTCTTCGTCGTGTATATCATCGTCCCCTTCGTCTTCCTCTTCCTCCACCGGATGGCCAGATTCTGAAATGGCCAAACTTGAAGGTTTTCGATTTTGAGGAGTTGAAATCTGCCACAAACAATTTCAGGTCTGACACATTGCTGGGTGAAGGTGGCTTTGGCAGAGTTTACAAGGGATGGTTGGATGAGGATACCCTCGCCCCTACCAAAGCAGGCTGCGGAATGGTCGTTGCCATAAAATGGTTGAACCCCGAAAGCACGCAAGGGTTTGACCAGTGGCAGACAGAACTAAACATTATGAGAAGGTTTTCTCACCCCAACCTGGTCAATTTATTGGGTTACTGTTGGGACGATGATGAGCATCTTCTTGTGTATGAGTTCATGCCAAAGGGAAGCTTAGACAATCATCTATTCAAAAGAAATCGTAACTTAGAATTACTTTCTTGGAACACACGGCTTAAAATAGCTATTGGTGTAGCTCGGGGATTAGCTTTCTTGCATGCTTCTGAAAACAACGTCATTCACAGAGATTTCAAGTCCTCAAATATACTACTTGATGGAAATTACAATCCAAAGATCTCAGATTTTGGCTTGGCAACATTGGGGTCTTCTGAGGGACAATCCCACAATTACAATCCAGAGATCTCAGATTTTGGCTTGGCGAAATTGGGGCCTTCTGGGGGACAATCACATGTAACTACCAGGGTCATGGGCACGTATGGTTATGCAGCTCCAGAATACATAGCAACAGGCCACTTGTATGTGAAGAGTGATGTCTATGGATTTGGTGTAGTGCTGCTTGAAATACTTACAGGCATGCGGGCACTTGACACAAATCGGCCAACAGGGCAGCAGAACCTAGTTGAATGGACCAAGCCTCTTCTCTCTTCCAAGAAAAAGTTGAAAACAATAATGGATGCTAAGATAGTGGGTCAATATTCACTTCAGGCAGCATGGCAAGCAGCACAACTTACTATGAAATGCCTACAATCTATCCCTGAAGAACGTCCTTCTATGAAAGATGTAGTTGAGGCATTGGAAGCCATTGAAGCTATCCAAAATTAG 1254 0.4482 MGVCFSSGPTQHSSSLDRPHYSGSASTNCKNVGITKTTSSSTENRQFTVIASGSIDDEESIHYLLRRVYHRPLRLPLPPPDGQILKWPNLKVFDFEELKSATNNFRSDTLLGEGGFGRVYKGWLDEDTLAPTKAGCGMVVAIKWLNPESTQGFDQWQTELNIMRRFSHPNLVNLLGYCWDDDEHLLVYEFMPKGSLDNHLFKRNRNLELLSWNTRLKIAIGVARGLAFLHASENNVIHRDFKSSNILLDGNYNPKISDFGLATLGSSEGQSHNYNPEISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRALDTNRPTGQQNLVEWTKPLLSSKKKLKTIMDAKIVGQYSLQAAWQAAQLTMKCLQSIPEERPSMKDVVEALEAIEAIQN* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0951 417 ProSitePatterns Protein kinases ATP-binding region signature. 111 143 IPR017441 GO:0005524
Gso16g0951 417 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 272 415 - -
Gso16g0951 417 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 77 272 - -
Gso16g0951 417 Gene3D Phosphorylase Kinase; domain 1 89 190 - -
Gso16g0951 417 PANTHER OS01G0588500 PROTEIN-RELATED 77 272 - -
Gso16g0951 417 PANTHER OS01G0588500 PROTEIN-RELATED 272 415 - -
Gso16g0951 417 ProSiteProfiles Protein kinase domain profile. 105 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0951 417 SUPERFAMILY Protein kinase-like (PK-like) 84 411 IPR011009 -
Gso16g0951 417 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Gso16g0951 417 Gene3D Transferase(Phosphotransferase) domain 1 191 272 - -
Gso16g0951 417 Pfam Protein kinase domain 275 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0951 417 Coils Coil 405 417 - -
Gso16g0951 417 Pfam Protein tyrosine and serine/threonine kinase 109 266 IPR001245 GO:0004672|GO:0006468
Gso16g0951 417 Gene3D Transferase(Phosphotransferase) domain 1 273 417 - -
Gso16g0951 417 CDD STKc_IRAK 111 412 - -
Gso16g0951 417 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0951 Gso-Chr16 26311784 26315209 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0951 91 409 Glycoside Hydrolase AT3G07070 45.938 3.60e-93 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gso16g0951 PK_Tyr_Ser-Thr 1.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0951 - - gmx:100820454 772.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso11g0724 11 6463413 6468284 Gso16g0951 16 26311784 26315209 PCT
Gso16g0951 16 26311784 26315209 Gso11g0724 11 6463413 6468284 PCT