Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0949 ATGCCAACGCTCATCTTTTATTGGTTAATTTCGTCGGTAAACTGCATGGGTCTCCGCTTCTCCTCTGGCTCGGCACCTCACTCCTCTTCCCTCAACGGCTCTCACTGTTCAGGTTCAGCAAGAACTGGCAGCAAGAACGTGGGGTTCTCCGCAACCGGGAAGAGTCAGTTTTCGGAGATTGCGAGTGGAAGCGACGATCGCGAAGAGTCTCTTGGTCGGATTCTGAAATGGCCAAACTTGAAGGTGTTTAGTTTTGAGGAGCTGATTTCTGCCTCAAGGCGTTTCAGGTATGACATACAGGGGTTAGTGATCGGTAAAGGTTGTTTTGGCCCAGTTTACAAGGGATGGTTGGATGAGAATACCCTTACCCCTGCCAAAGTAGGCTATGGAATGGCCGTTGCGATCAAAATGTTTAACCAAGATTACTTCCGAGGGTTTGAAGAGTGGCAGTCAGAAGTAAACTTTTTAGGAAGGCTTTCTCACCCCAACCTGGTTAATCTATTGGGATACTGTTGGGACGAGGATAAGCTTCTTCTAGTGTATGAGTTCATGCCAAAGGGAAGCTTAGACTATCATCTATTCAGAGGAAACATAACACCACTTTCTTGGAACACACGGCTTAAAATAGCTATTGGTGCAGCTTGGGGATTAGCTTTCTTGCACGCCTCTGAAAATAATGTCATATTCAGTGATTTCAAGGCCTCAAATATACTTCTTGACGGGAATTACAATGCAAAGATCTCAGATTTTGGCTTTGCTAGATGGGGGCCTTTTGAAGGAGAATCACATGTATCTACCAGGGTCATTGGCACATATGATTATGCTCCTCCAGAATACATAGCAACAGGTAGGAGGAATAATCTTCTAAGAGCAAACAAGAGAGAGAAGTTAGATGGGTCAATCAAATTCAATTCAACCAGTCTTTAA 927 0.4455 MPTLIFYWLISSVNCMGLRFSSGSAPHSSSLNGSHCSGSARTGSKNVGFSATGKSQFSEIASGSDDREESLGRILKWPNLKVFSFEELISASRRFRYDIQGLVIGKGCFGPVYKGWLDENTLTPAKVGYGMAVAIKMFNQDYFRGFEEWQSEVNFLGRLSHPNLVNLLGYCWDEDKLLLVYEFMPKGSLDYHLFRGNITPLSWNTRLKIAIGAAWGLAFLHASENNVIFSDFKASNILLDGNYNAKISDFGFARWGPFEGESHVSTRVIGTYDYAPPEYIATGRRNNLLRANKREKLDGSIKFNSTSL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0949 308 Pfam Protein tyrosine and serine/threonine kinase 103 283 IPR001245 GO:0004672|GO:0006468
Gso16g0949 308 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 54 284 - -
Gso16g0949 308 SUPERFAMILY Protein kinase-like (PK-like) 78 287 IPR011009 -
Gso16g0949 308 Gene3D Transferase(Phosphotransferase) domain 1 184 293 - -
Gso16g0949 308 Gene3D Phosphorylase Kinase; domain 1 79 183 - -
Gso16g0949 308 PANTHER OS01G0588500 PROTEIN-RELATED 54 284 - -
Gso16g0949 308 ProSiteProfiles Protein kinase domain profile. 98 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0949 Gso-Chr16 26261984 26265541 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0949 42 284 Glycoside Hydrolase AT3G07070 43.902 5.71e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso16g0949 PK_Tyr_Ser-Thr 7.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0949 - - gmx:100818310 566.614