Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0941 ATGGGAGGCTTATTGCACATGTTTGAGTTCAATCAGGGTAGGATGGCCAAGAAAGTTCATGCCCAGAGGAGCAATAATGGTGACCTGGAAAGCTCTGGAAATGGCATGGAACTGCAAGTAGAAACATCTCAGGTCCACTGTGCAGAAGGAGAATTACCATACTCTTGTCAAGTAGAAGATGGCTGGTCAAAGAAAAATAGTTACTCAAATGTGGTTTCAGTGAAAAAACTGAACAAAGAGGATTTATCCAAACAATCAGGCACCACCAGAAATAATGCACCAAGCCTTGTGGCAAGGTTGATGGGGATAGACACCATGCCATTGCCATTAGAGACTAATTCCGTTGTTCCATTAGATGAAAGCAAACATAAAAATATGGAGAGGAAGTTTTCAAAAAAAGGAATGAATCGAAGGGGTTCGGTTGGCAGGGGTTCCTCCAACTTTAATTCTTCTAGCCAGATGGAATTTGATTCTTTTTATCAAGACATCGATGGTGATCATGATGATGGATGCAGACAGAATTTTGGAAAACCAAGGCCTAGGGAACATCCTCAGGAAGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGCATATCAAGAATCAAGGTTTAAGGAGTGTTCAAAGGATGTTGAAATTGGAAGTGGTTCTAGGAGAATACCTTCTCAAGAGAACCTGAGGAAGGAAAAGATGCTACAGATTGCAAGTTCAAAGACAGATAGCCACACATTTAAGACAAAGCTACCTAATGGTAATATGATGGAGCCAATCCCAACTACGAAAAAAGATTTCTTTCCTTCAAGAAGTAAAACACTAAGTCGAGACTTTGAGGAGTCTTTAATGATGAAATCTGGAAGCAGATTAGATATATGTGCTTCTTCCGCTCAGATAGTTATCTTGAAGCCTGGTTCTGATAGGATTTGCAATTGCAACCATGAAGAGAATTGCATCAATTTATCAGGCACTTTACACGGGAGAAAAGGTTTAGAAGATTTTCTTGAGGAAGTGAGGGAGCGGTTGGAATGTGAACTGCAAGGGATTAGAGCTAGTGGAATTGAGACACCTTACAATGAAAAACTATCTGATGCTAAAGAGGTCAGAGAAAGTGTGACTAGAGATGCTGAACCAAATTTACTCCGCTCAGAATCAACAAGATCATATAAAAGTAAAATGCAGTTCAATGGACCAAGTTCTCCAGAACTTTTCAACATAGATACCAGAAGATTCTTGTCAGAGAGGCTAAGAAATATTGTAAATGGTGAACTGCATTTGGACATTCCTGAAGTGGCCTGTTACAATGATAGAGTTAGACTAAAGCAGGATACTACAAAGTGTGCAAATGACAAGAGCCAGTGGAGAATTTTGAAAGAGAAAAAAGAATTACAAACAGGTTCCTATAGACACAAATTAGATGACAATGTATTGTTCCACAAGGATTTGTCTCCTAGAAATCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCATTTGGGAGGCTTCTTCTAGAGGACCGCCACATTTTAACGGGCGCCCTTATTCAGAGGAAGCTTGAAGCTGTTGAAGCAATGCCTGTGGATGTCAAAAAAAAGAAGAAAGATGGGTTTAATATTAAAGAAAAACTTTCCAATTTTACTCTTGGTCTCAGAGGGAAGCTGTTTGGCAAAAGGGTTCAGTCAATAGTTGAATCACATGGCAGTGAATACGGTCCAATTTTGAGAGATATCAGGAGTGGACCAACTGTTTTCATGAAATATGGTGAGAGACATGAGAACTCAACTGAGGTACCTCCTAGTCCTGCATCTATGTGCAGCTGTGTTCATGAAAAAAATTGGAGACAGACTGGATATTCAAGTTTAACATCAACTCCAGATGTATCTTCATTAGATGATATTTTTATTCCCAAGGTTTTCAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGACAACTCAGTCAACTTGATTCCGATGGCTCTGAGGACTTCACCACTAAGCAGGAGCCTGTTGAGTCAGAATTAGTTCAATTAGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTTTGTACTTTGGTTCATGGGATAAGTCTCTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAGTCTCATGACAATTTGATCAAGGAGGATGAAAGATCCACAAAGGATCAGCAGAACAAAAACAAGTTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCACTTTCCATAGTTCTTGGACCACCTTTGACTTTGTCTAGATTCCGAAGGAAACTAAGCAATTCCTCCTTGCAGCCTCCACCATGTGGAAACGAACTACTGAAGTTGACATGGGACATTGTCAGTGTTTCTTTAAATCCTTCATCTAACGCATCTCTTTATTCACTTGATAGTTTGGTGGCACAAGATCTAGGATCTATCTCCTGGTCTGGACTAACAAATGATCATATTGATACATTGGAAAGAGAGATGGCATGTCTAATCACTGATGATTTGGTTGAAGAATTCACAAATGATATGGTCTTTTAA 2577 0.395 MGGLLHMFEFNQGRMAKKVHAQRSNNGDLESSGNGMELQVETSQVHCAEGELPYSCQVEDGWSKKNSYSNVVSVKKLNKEDLSKQSGTTRNNAPSLVARLMGIDTMPLPLETNSVVPLDESKHKNMERKFSKKGMNRRGSVGRGSSNFNSSSQMEFDSFYQDIDGDHDDGCRQNFGKPRPREHPQEEELQKFKKEFEAYQESRFKECSKDVEIGSGSRRIPSQENLRKEKMLQIASSKTDSHTFKTKLPNGNMMEPIPTTKKDFFPSRSKTLSRDFEESLMMKSGSRLDICASSAQIVILKPGSDRICNCNHEENCINLSGTLHGRKGLEDFLEEVRERLECELQGIRASGIETPYNEKLSDAKEVRESVTRDAEPNLLRSESTRSYKSKMQFNGPSSPELFNIDTRRFLSERLRNIVNGELHLDIPEVACYNDRVRLKQDTTKCANDKSQWRILKEKKELQTGSYRHKLDDNVLFHKDLSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLEAVEAMPVDVKKKKKDGFNIKEKLSNFTLGLRGKLFGKRVQSIVESHGSEYGPILRDIRSGPTVFMKYGERHENSTEVPPSPASMCSCVHEKNWRQTGYSSLTSTPDVSSLDDIFIPKVFRDISSGLNELKRQLSQLDSDGSEDFTTKQEPVESELVQLDDPAESYVRDLLVASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEESHDNLIKEDERSTKDQQNKNKLEHKVLLDLLNEALSIVLGPPLTLSRFRRKLSNSSLQPPPCGNELLKLTWDIVSVSLNPSSNASLYSLDSLVAQDLGSISWSGLTNDHIDTLEREMACLITDDLVEEFTNDMVF* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0941 858 MobiDBLite consensus disorder prediction 19 42 - -
Gso16g0941 858 MobiDBLite consensus disorder prediction 124 151 - -
Gso16g0941 858 Pfam Domain of unknown function (DUF4378) 683 851 IPR025486 -
Gso16g0941 858 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 857 - -
Gso16g0941 858 MobiDBLite consensus disorder prediction 236 261 - -
Gso16g0941 858 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 857 - -
Gso16g0941 858 MobiDBLite consensus disorder prediction 25 41 - -
Gso16g0941 858 Pfam DUF761-associated sequence motif 93 107 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0941 Gso-Chr16 25891021 25896536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0941 74 856 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 37.561 3.94e-131 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0941 - - gmx:100810825 1678.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1354 1 50190065 50196258 Gso16g0941 16 25891021 25896536 PCT
Gso11g0729 11 6513841 6520013 Gso16g0941 16 25891021 25896536 PCT
Gso16g0941 16 25891021 25896536 Gso1g1354 1 50190065 50196258 PCT
Gso16g0941 16 25891021 25896536 Gso11g0729 11 6513841 6520013 PCT