Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0940 ATGTCTTCTTCTGGTTATACTACGAGCAGTGCTTTGTTTTTTCTGTTTCTGACTGTTCTTGCTGCAAAAGTTAGCTTTTGCTTTTCTACCAAGGTTTATGTAGTGTACATGGGAAGCAAAAGTGGGGAACACCCAGATGATATTCTGAAGGAAAATCATCAAATTCTTGCTTCTGTTCACAGTGGAAGCATTGAACAAGCCCAAGCTTCTCATATTTATACCTACAGACATGGTTTCAGAGGCTTTGCAGCCAAACTCAGTGATGAACAGGCTTCCCAAATTTCTAAAATGCCAGGAGTGGTTTCTGTTTTTCCCAATTCTAAAAGAAAGTTGCACACAACTCACTCATGGGATTTCATGGGACTTCTGGATGACCAAACCATGGAGACTCTTGGTTACTCCATCAGAAACCAAGAAAACATCATCATTGGTTTCATTGATACTGGAATTTGGCCAGAATCCCCAAGCTTCAGTGACACCGACATGCCTGCAGTGCCACCTGGCTGGAAAGGCCAATGTCAATCAGGGGAGGGATTCAATTCCTCATCATGCAACAGGAAAGTGATAGGAGCAAGATACTACAGGAGTGGATATGAAGCTGCTGAGGGAGATTCAGATGCAAAAAAGTCCTTCAGATCTGCAAGGGACAGCACTGGCCATGGGAGCCACACAGCCTCCATAGCAGCAGGGAGGTTTGTGGCAAACATGAACTACAAGGGGCTGGCAAGTGGAGGAGCAAGGGGAGGTGCACCAATGGCCAGAATTGCAGTGTACAAGACATGTTGGGATTCTGGATGCTACGATGTGGACTTGCTAGCAGCCTTTGATGATGCTATAAGAGATGGGGTTCACATTTTGTCTCTTTCTCTGGGGGCTGAATCACCCCAGGGAGACTATTTCAGTGATGCCATTTCTGTGGGGTCATTCCATGCTGTTAGTCGTGGCGTGCTGGTTGTTGCATCGGCTGGAAATGAAGGCAGTGCTGGCTCTGCCACTAATCTTGCTCCATGGATGCTCACTGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCTGATATCATGTTGGGAAATGGTGCCAAAATCATGGGTGAAAGTCTCAGCCTTTTTGAAATGAATGCCTCCACAAGGATAATTTCTGCTTCTGCAGCCAATGGAGGATACTTTACTCCTTATCAATCCAGTTACTGTTTGGAGAGTTCTCTGAATAAAACAAAGAGCAAAGGCAAGGTTCTGGTGTGTAGACACGCAGAGAGTTCAACAGAGTCAAAGGTGGAAAAGAGCAAGATAGTGAAAGCTGCAGGTGGAGTTGGCATGATACTTATTGATGAGACAGATCAAGATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTTGGAAAGAAAACAGGAGAAAAGATTCTATCCTATCTCAGAACTACACGTAAGCCTGAATCAAGAATATTTGGAGCAAAGACAGTTCTTGGAGCTCATCCTGCACCACGTGTAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTGAACCCAGAAATTCTGAAGCCCGATGTCACAGCTCCAGGACTAAATATCCTTGCAGCATGGTCTCCAGCAGCTGGAAACATGTTCAACATTCTCTCAGGAACTTCTATGGCTTGTCCTCATGTAACAGGAATTGCAACCTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCTTCTGCTATCAAATCTGCCATCTTGACCACTGCTACAATTCTGGATAAGCACCACAGACCCATCATTGCTGATCCAGAACAAAGAAGGGCTAATGCATTTGATTATGGATCGGGGTTTGTGAACCCTGCAAGAGTTCTTGATCCTGGTCTCATCTATGACTTAAAGCCAGCAGATTTTGTTGCATTCCTGTGTTCACTTGGTTATGATCCGAGGTCACTCCACCAAGTTACAAGAGACAACAGCACATGTGATAGGGCATTTAGCACAGCATCTGACCTCAACTACCCGTCTATTTCAGTGCCAAATCTTAAAGACAACTTTTCAGTTACTAGGATTGTGACCAATGTTGGGAAAGCAAAAAGTGTTTATAAAGCTGTAGTGTCTCCTCCACCTGGTGTTAGAGTCAGTGTTATACCTAACCGGTTAATCTTCTCAAGAATTGGACAGAAAATCAATTTCACTGTGAATTTCAAAGTAACTGCTCCATCAAAGGGATATGCATTTGGGCTCTTGTCATGGAGGAATAGAAGATCACAAGTCACTAGTCCTTTGGTTGTCCGGGTTGCTCCTGGAAAAAATGGGTTGGTCAGATAG 2289 0.4443 MSSSGYTTSSALFFLFLTVLAAKVSFCFSTKVYVVYMGSKSGEHPDDILKENHQILASVHSGSIEQAQASHIYTYRHGFRGFAAKLSDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFMGLLDDQTMETLGYSIRNQENIIIGFIDTGIWPESPSFSDTDMPAVPPGWKGQCQSGEGFNSSSCNRKVIGARYYRSGYEAAEGDSDAKKSFRSARDSTGHGSHTASIAAGRFVANMNYKGLASGGARGGAPMARIAVYKTCWDSGCYDVDLLAAFDDAIRDGVHILSLSLGAESPQGDYFSDAISVGSFHAVSRGVLVVASAGNEGSAGSATNLAPWMLTVAASSTDRDFTSDIMLGNGAKIMGESLSLFEMNASTRIISASAANGGYFTPYQSSYCLESSLNKTKSKGKVLVCRHAESSTESKVEKSKIVKAAGGVGMILIDETDQDVAIPFVIPSAIVGKKTGEKILSYLRTTRKPESRIFGAKTVLGAHPAPRVAAFSSKGPNALNPEILKPDVTAPGLNILAAWSPAAGNMFNILSGTSMACPHVTGIATLVKAVHPSWSPSAIKSAILTTATILDKHHRPIIADPEQRRANAFDYGSGFVNPARVLDPGLIYDLKPADFVAFLCSLGYDPRSLHQVTRDNSTCDRAFSTASDLNYPSISVPNLKDNFSVTRIVTNVGKAKSVYKAVVSPPPGVRVSVIPNRLIFSRIGQKINFTVNFKVTAPSKGYAFGLLSWRNRRSQVTSPLVVRVAPGKNGLVR* 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0940 762 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Gso16g0940 762 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Gso16g0940 762 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Gso16g0940 762 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Gso16g0940 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 755 IPR045051 -
Gso16g0940 762 SUPERFAMILY Subtilisin-like 111 615 IPR036852 GO:0004252|GO:0006508
Gso16g0940 762 Pfam PA domain 397 468 IPR003137 -
Gso16g0940 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Gso16g0940 762 Pfam Subtilase family 139 579 IPR000209 GO:0006508|GO:0008236
Gso16g0940 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Gso16g0940 762 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Gso16g0940 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 112 IPR037045 -
Gso16g0940 762 Gene3D - 347 489 - -
Gso16g0940 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 755 - -
Gso16g0940 762 CDD PA_subtilisin_like 356 482 - -
Gso16g0940 762 Gene3D - 628 754 - -
Gso16g0940 762 ProSiteProfiles Serine proteases, subtilase domain profile. 116 611 - -
Gso16g0940 762 CDD Peptidases_S8_3 110 577 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0940 Gso-Chr16 25841969 25847457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0940 30 752 Subtilisin-like Serine Gene Family AT1G32960 41.799 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0940 - - gmx:100819201 1479.54