Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0929 ATGACCCTTCAAGCTGATTCAGCAGCAGCACCACCACCACTACCACCACCGGATTCAGCAGCCACCAACGGCATCTCACCCACAGCAGAGGAAACCTCACAACCGCCGCGTCCAACCCCGCCGCCAGAACTTCGCGTCCCAATATGGTGGCCGGAGGACGGCACCCTCAGCATGGATTGGGTGGAGAATCTGATGCGGTGCTTCGATTGGTGCTCTCGGAACGTCCCTCCGTCGGAGCTCCCTTCGGTTCTCCCCGTCGAAGTCTTCGACTCGCTCATCCTCGTCGCCTCCAAGATGCTCCACAAGGAGCCCAATTGTGTCCCCGTAGACCCCTTCCGCCCTACCCTCGATGATAATAGCACTCCCTCCGACTCCGCTGCCGCTGCCTCTGTTGTCGTCGTCGGCGATGTTCACGGCCAACTGCATGATCTTCTCTTCCTCCTCCGAGATGCCGGGTTCCCCTCGCGGGATCGAATCTTTGTTTTCAACGGGGATTACGTGGATCGGGGAGCGTGGGGGCTCGAAACCTTCTTGCTCTTGTTGGCTTGGAAGGTATTCATGCCACATAACATATATTTGCTACGAGGGAATCACGAATCAAAATACTGTACATCGGTTTATGGTTTTGAGAAAGAAGTAATGGTTAAGTATGGTGATAAAGGTAAGCATGTGTACCGGAAATGTTTGGGGTGCTTTGAAGGTCTTCCTTTGGCTTCTATTATAGCAGGGTGTGTATACACAGCTCATGGAGGACTTTTCCGCAGTGTAACTGTGATGCCATCAAAGAGGTTAAAAGGGAAGAAGAACCGTAAGATTAATGTTAATCATGAGAGCAAAATTCTATCTCTTGGTTCCTTGGAAGAATTGTGTAAGGCTCGACGATCAGTTTTGGATCCTCCTTGGGAAGGCCCAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCATCCAAAAATCCTGGTCTTGCTCCAAACAAAGAAAGAGGCATTGGCTTGATGTGGGGTCCCGATTGTACTGAAGAATTTTTGAAGAAGTACCAACTAAAGTTGATCATCAGGTCACATGAAGGTCCTGATGCTAGGGAAAAAAGGGATGGTTTTGAGGGAATGGATGAAGGTTACACTATTGATCATGTTGTAGATTCTGGAAAGCTGGTCACTGTGTTTAGTGCTCCAGATTACCCACAGTTTCAGGCAACACAGGTGAGGTATAACAACAAAGGCGCCTATGTTATCCTTGAACCCCCGAATTTTGACAATCCTATATTTCATGGATTTTCAGCAGTTACTCCAAGGCCGAAGGCGAATCCCTATTACGATTATGAAGAGGTGATAGACTCCGATGAAGAATTGGATTTGGCCTCCATGGTAACTTCCTGA 1380 0.4891 MTLQADSAAAPPPLPPPDSAATNGISPTAEETSQPPRPTPPPELRVPIWWPEDGTLSMDWVENLMRCFDWCSRNVPPSELPSVLPVEVFDSLILVASKMLHKEPNCVPVDPFRPTLDDNSTPSDSAAAASVVVVGDVHGQLHDLLFLLRDAGFPSRDRIFVFNGDYVDRGAWGLETFLLLLAWKVFMPHNIYLLRGNHESKYCTSVYGFEKEVMVKYGDKGKHVYRKCLGCFEGLPLASIIAGCVYTAHGGLFRSVTVMPSKRLKGKKNRKINVNHESKILSLGSLEELCKARRSVLDPPWEGPNLIPGDVLWSDPSKNPGLAPNKERGIGLMWGPDCTEEFLKKYQLKLIIRSHEGPDAREKRDGFEGMDEGYTIDHVVDSGKLVTVFSAPDYPQFQATQVRYNNKGAYVILEPPNFDNPIFHGFSAVTPRPKANPYYDYEEVIDSDEELDLASMVTS* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0929 459 MobiDBLite consensus disorder prediction 1 46 - -
Gso16g0929 459 CDD MPP_PP7 50 440 IPR041754 -
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 130 157 IPR006186 GO:0016787
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 160 187 IPR006186 GO:0016787
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 193 217 IPR006186 GO:0016787
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 230 256 IPR006186 GO:0016787
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 290 317 IPR006186 GO:0016787
Gso16g0929 459 PRINTS Serine/threonine phosphatase family signature 384 400 IPR006186 GO:0016787
Gso16g0929 459 SUPERFAMILY Metallo-dependent phosphatases 80 434 IPR029052 -
Gso16g0929 459 SMART pp2a_7 84 433 IPR006186 GO:0016787
Gso16g0929 459 Pfam Calcineurin-like phosphoesterase 130 358 IPR004843 GO:0016787
Gso16g0929 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 7 31 456 - -
Gso16g0929 459 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 31 456 - -
Gso16g0929 459 ProSitePatterns Serine/threonine specific protein phosphatases signature. 194 199 IPR006186 GO:0016787
Gso16g0929 459 Gene3D - 79 448 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0929 Gso-Chr16 25446060 25450829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0929 39 350 Calmodulin-binding Proteins AT5G63870 68.051 9.00e-155 439
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0929 K04460 - gmx:100802851 901.738