Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0914 ATGACACGAGGGCTGAGACTCCTCCAATCCGCGGCGGCGCCACCGCCGGAGGCCGCCGCAGCCGTCGAGTCGGACTTCGTAGTGATCCTGGCGGCGCTCCTCTGCGCCCTCATATGCGTGGTGGGCCTCGTTGCCATCGCGCGCTGCGCCTGGCTCCGCCGGGGACCCGTCGCCGGCTCCGGCTCTGGTGCCGGAGAATCGCCGGCGACGGCGAACAAGGGCCTCAAGAAGAAAGTGGTGAATTCACTGCCGAAGTTCACCTACGCCGGCGGCGGCGACCGGTGCAAGTGGTCGGAGTGCGCGATTTGCCTGACGGAGTTCGGCGCCGGCGACGAGATCCGGGTGCTGCCGCAGTGCGGCCACGGGTTCCACGTGGCGTGTGTCGACACGTGGCTCGCGTCGCACTCCTCGTGTCCCTCGTGTCGCGCGCCGTTTGCCGTCACCGCGCGCTGCCATAAGTGCGGCCATTTTCCGGCGGTTTCCGCAGCCGCCGCATCGGAGTCCAAGGCCGTCGGCGGCGACAATGCTGCCGATAGCACTGCGAATGCGAATCGTAATAATGTTATTATTACGAATGGATTTAGTAATTACGGTTTCTTGCCTTGA 606 0.6518 MTRGLRLLQSAAAPPPEAAAAVESDFVVILAALLCALICVVGLVAIARCAWLRRGPVAGSGSGAGESPATANKGLKKKVVNSLPKFTYAGGGDRCKWSECAICLTEFGAGDEIRVLPQCGHGFHVACVDTWLASHSSCPSCRAPFAVTARCHKCGHFPAVSAAAASESKAVGGDNAADSTANANRNNVIITNGFSNYGFLP* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0914 201 PANTHER ANAPHASE-PROMOTING COMPLEX SUBUNIT 11 RING-H2 FINGER PROTEIN 1 191 - -
Gso16g0914 201 SMART ring_2 100 141 IPR001841 -
Gso16g0914 201 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 191 - -
Gso16g0914 201 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Gso16g0914 201 CDD RING-H2_PA-TM-RING 99 142 - -
Gso16g0914 201 Pfam Ring finger domain 99 142 IPR001841 -
Gso16g0914 201 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 148 IPR013083 -
Gso16g0914 201 SUPERFAMILY RING/U-box 94 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0914 Gso-Chr16 24915995 24917218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0914 1 154 C3H Transcription Factor Family AT1G20823 61.212 3.24e-61 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0914 - - gmx:100813341 378.252