Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0910 ATGAAGTTTCCTCTTCTTCTCATTTCCTTTCTTCTTGCCTCCCTAATCACCTTCTACTGCTTCATCCCAACCTCAGGAACGCCCCATTCAAATGAAGAACGCGACATCCACAGTGCACTTCACCATCGACCCGCTTCGCGATCCCTTCTCTCTCTTCCTCCTAAGGCTGCAACTACGGCACTGATTGTGACCCTAGATGGGACTATGCACTTGGTGGACCAATTGGAGAGTGGTTCCATGAGAGTCATATGGTCGTTCTCGACAGGATCACCAATCTATCAATCACATCGAGCACCAACCAAAAAGGATAATGGTAAAGAAAATGCATCTGCAGCACTAACGAGTGGGTTCATGGAATGCGGGGAAGGGAATGACTGGTCATTGTATATGCACGACAAGCACTTTGGTAAAATGAGAATCTCAGAATCTATTGCAGAATATGTAGCTCGTACACCTACCTTTTCAGATGATGGAGCAGTAACACTTGGATCCAAAAGAAGCACTTTGTTTGAAGTTGATGCTAAAACTGGATCAATCATTAAAATCCATGCGATGTCTGATATTGATAATGCTTCTGCACCTTGGAGTGATGGCAACCAAGGTGTTACAAATATCCTCAACGTAAACGATAAGGATCTTGCTGATCCTATGAAGCTTAATTCACCACAGCCGCTGCTTAAGATTTTTAGGACAGATTATTCTCTTAAATCTGTTGGTCCTAGCTCAGGAATAGTTTTGTGGACTATGGCAGTAGCTGAATTAGAGGCTGTCTTATTATGCCAACATACCTCTTTTGATCTAGAGGATGAGTATGCTTCTGACAGTAGCCTCAACTTTAGGATGCCATACCCATGTCAAGAGATAAACCAAGTCATTCGCCTGAAAAAGAATTTTCAGTTTGAACCTTCACTAACTGAAAGATTACTTGTGGATTATCATGAAAATGATATGCTCTCAATTCCTAACTCAAATCTAATACTTCCTTCACAGCCAAATATTGATAGATTATTCAATGGTCATGATGATAATATAATGCTCCCTCAACAGCCTCTTGTGGAGATTACAACACCAGGGGAAGTTTATCTGAACAGGACAAGTGAATGGCCAACTCCATTACCTCTTATATTGTTTACGGTCTTTCTTGTGGCCTTTTCAGTCATCTATCCTCTAGTGATTAAGAATCAAGATGTAATGAAGGACCAAAACAGTGAGTCTGAATTAAAAAGCTCGCCTGCTAAGAAAAAGAAAACACGAAAATCAGGGAAGAAAAATGACACTATCGATAAAAGGGAAAAGCACCTGTCTCCAGAGAATAAGGATGTTCTGACACAAAAGGGTAATTATAGAGAAGTATGGAAGCACTTCAACCAAGTTGATGAAAGTGTTGATGGACGAAGGATTGGTAAATTATTTGTTTCAAATAAAGTGATTGCTAAGGGCAGCAACGGTACCATTGTCCTTGAGGGAATATATGAAGGCCGAGCAGTTGCTGTTAAACGTCTCGTTAAGGCTCATCATGATGTAGCTTATAAAGAAATCCAAAATCTTATTGTGTCTGATCAGCATCCAAATATTGTCCGATGGCATGGGGTGGAGTATGATAGCGATTTTGTTTACCTTGCTTTGGAACGTTGTACATGCAATTTAGATGATTTGATTCAAATTTATTCAGATATATCAGAAAACTCTGTGCTTATGAAGGACCAAGGTTTCAGATGTTTGATAAAGTCCCAAATGGAGATGGAGAAGTATAATACACAATGTCTTTGGAAGGAAAACCGCTATCCATCGCCTCTATTACTAAAACTAATGAGGGACATTGTGTCTGGGGTTGTTCATTTGCATGAATTGGGAATGATACATCGGGATTTGAAACCACAAAATGTTCTAATAATCAAGGAAAAATCCTTATGTGCAAAGCTTTCTGATATGGGGATTAGCAAATGTCTTTTGGAAAATATGTCTTCTTTGGGTAATAATGCTACTGGTGGTGGCAGTTCAGGTTGGCAAGCACCAGAGCAACTTGTTGAAGGACGTCAAACACGGGCAGTAGATATATTTAGTTTAGGTTGTGTCCTCTTTTTCTGTGTTTCTGGGGGAAAACATCCATTTGGAGAACGTATTGAACGGGATATCAATATTTTGAAAAATAAAATGGATCTTTTCCTAGTGGAGTTCATTCCTGAAGCCAAAGATCTTATTAGTCGTCTATTAAACCCTAACCCTGATGTAAGGCCAAAGGCAACTGAGGTATTGTACCATCCTTTTTTCTGGAGTTCTGAGATGAGACTTTCCTTTTTACGTGACACCAGTGACAGGGTGGAACTGGAGAATAGAGAGACTAATTCTGATCTTTTGGTGACATTAGAAAGCATTGCTACAGTGGCCTTGGGTGGAAAATGGGATGAAAGGATGGAACCAGCTTTCATTGCTAACATCGGTTATTACCGGCGATATAATTTTAACAGTGTTCGAGACTTGTTGCGAGTTATGAGAAACAAACTAAATCATTATAGAGAAATGCCTCGAGAAATCCAGGAACTTGTAGGACCTGTTCCCGAAGGATTCTTCAATTACTTTGCAAGTCGATACCCAAGACTCTTGATTGAAGTGTATAAAGTTATACTCCAATACTGCAAGGAGGAAGAATGTTTCCTAAGATATTTTAAAAATGTTGATTAG 2682 0.3963 MKFPLLLISFLLASLITFYCFIPTSGTPHSNEERDIHSALHHRPASRSLLSLPPKAATTALIVTLDGTMHLVDQLESGSMRVIWSFSTGSPIYQSHRAPTKKDNGKENASAALTSGFMECGEGNDWSLYMHDKHFGKMRISESIAEYVARTPTFSDDGAVTLGSKRSTLFEVDAKTGSIIKIHAMSDIDNASAPWSDGNQGVTNILNVNDKDLADPMKLNSPQPLLKIFRTDYSLKSVGPSSGIVLWTMAVAELEAVLLCQHTSFDLEDEYASDSSLNFRMPYPCQEINQVIRLKKNFQFEPSLTERLLVDYHENDMLSIPNSNLILPSQPNIDRLFNGHDDNIMLPQQPLVEITTPGEVYLNRTSEWPTPLPLILFTVFLVAFSVIYPLVIKNQDVMKDQNSESELKSSPAKKKKTRKSGKKNDTIDKREKHLSPENKDVLTQKGNYREVWKHFNQVDESVDGRRIGKLFVSNKVIAKGSNGTIVLEGIYEGRAVAVKRLVKAHHDVAYKEIQNLIVSDQHPNIVRWHGVEYDSDFVYLALERCTCNLDDLIQIYSDISENSVLMKDQGFRCLIKSQMEMEKYNTQCLWKENRYPSPLLLKLMRDIVSGVVHLHELGMIHRDLKPQNVLIIKEKSLCAKLSDMGISKCLLENMSSLGNNATGGGSSGWQAPEQLVEGRQTRAVDIFSLGCVLFFCVSGGKHPFGERIERDINILKNKMDLFLVEFIPEAKDLISRLLNPNPDVRPKATEVLYHPFFWSSEMRLSFLRDTSDRVELENRETNSDLLVTLESIATVALGGKWDERMEPAFIANIGYYRRYNFNSVRDLLRVMRNKLNHYREMPREIQELVGPVPEGFFNYFASRYPRLLIEVYKVILQYCKEEECFLRYFKNVD* 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0910 893 Gene3D Phosphorylase Kinase; domain 1 457 543 - -
Gso16g0910 893 Gene3D KEN domain 760 893 IPR038357 -
Gso16g0910 893 ProSiteProfiles KEN domain profile. 760 891 IPR010513 GO:0004540|GO:0006397
Gso16g0910 893 Gene3D - 39 261 IPR015943 GO:0005515
Gso16g0910 893 PANTHER IRE1-RELATED 7 889 IPR045133 GO:0004521|GO:0004674|GO:0030968
Gso16g0910 893 MobiDBLite consensus disorder prediction 399 440 - -
Gso16g0910 893 Pfam Protein kinase domain 473 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0910 893 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Gso16g0910 893 PANTHER SERINE/THREONINE KINASE DOMAIN PROTEIN 7 889 - -
Gso16g0910 893 MobiDBLite consensus disorder prediction 421 440 - -
Gso16g0910 893 CDD RNase_Ire1 761 889 - -
Gso16g0910 893 ProSiteProfiles Protein kinase domain profile. 471 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0910 893 SMART serkin_6 471 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0910 893 Gene3D Transferase(Phosphotransferase) domain 1 575 759 - -
Gso16g0910 893 SMART PGNneu 822 876 - -
Gso16g0910 893 SUPERFAMILY Protein kinase-like (PK-like) 465 776 IPR011009 -
Gso16g0910 893 Pfam Ribonuclease 2-5A 763 889 IPR010513 GO:0004540|GO:0006397
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0910 Gso-Chr16 24736362 24747242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0910 497 756 MAP Kinase Kinase Kinase AT3G06030 27.652 6.52e-21 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Gso16g0910 Pkinase 3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0910 K08852 - gmx:100785904 1766.13