Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0906 ATGATCACTGATGTGCCCCCATCTATGACTCAAAACGGTAGGTCAAGCAGATATTCCTTTGGCTCAAGCAATGGCAATGGTGATACCCCTGCACAAAATGGCTCTGCTGTTATCAATGTTGATGATTATGATAGTGATAGCTCCAATTTTGCACCATCCACGCCATCAACTATGTCAATGGCTGTTCCAGCAGAACTAGGTGGAGCTGTACCCTTGATCAACAGATTCCAGGTGGATGGATTTTTAAAATTAATGCAGAAACAAATTCAATCTGCTGGGAAACATGGATTTTTTTCTAAAAGATCTGTAGGTCCCCAAGTTCGAGAAAAAGTTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCAACATCATTGCTCAAGTTAAATGTTGATTTTGTAAGTAGGGCAACAAAATTATTCCAAATAATTTTGAAATATATGGGAATTGATCCATCTGATCGTGTAACTCCAATAAGCTTAGATGAACGAGTTGAGCTTGTAGGGAAACTGTACAAGCAAAGTTTGAAACGACCAGAACTCCGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCTGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTGTGTGCATCCTCAATGTCTCCCAGTAAAGATATTAGCAGTTATCTATCAGAATACATTCATAACATAGCAAATGGTGTGGCTACTGATTCTGAGATTCAAGTCCTTGCATTAAATACATTAAATGCTTTGAAACATTCTGTCAAGGCTGGTCCCAGACATATAATTCCTGGGCGTGAGGAGATTGAAGCTCTGTTGACTGGGAGAAAGCTTACAACTATAGTGTTCTTCCTAGATGAAACTTTTGAAGAAATTACGTATGACATGTCAACCACAGTTGCCAATGCTGTTGAGGAACTTGCAGGGCTCATTAAACTGTCAACTTACTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCCAAAGCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATGCAAACAAATATATTGGGGATCTCCTGGCAGAATTTAAAGCTGCAAAGGATCGGAGTAAAGGAGAAATCTTGCACTGTAAACTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGAGCCTATGTTTGTGCAATTATCTTATGTACAGATGCAACATGATTATATTTTGGGAAATTACCCTGTTGGAAGGGATGATGCTGCTCAGCTTTCTGCCTTACAAATCTTAGCTGAGATTGGATTTCTTAGCACACCAGAATCATGCATTGACTGGAATTCACTTCTGGAGCGTTTCCTGCCCAGACAAATTTCAATGACACGAGCAAAACGGGAATGGGAGTATGACATTCTTTCTCGTTATCGTTCATTGGAGAATCTGACAAAAGATGATGCGCGACAACAATTTCTGCGTATATTGAGAGCACTTCCTTATGGAAATTCTGTTTTCTTCAATGTTCGCAAGATTGATGATCCTATTGGACTCTTACCTGGCCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGTCCAGTTCCTAAGGAATATTTGCACTCAGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTCTTTTTTAAAATGCGAGTTGCAGGTGTTCTCCACATATTCCAGTTTGAAACCAAGCAGGGAGAAGAAATTTGTGTAGCTCTTCAGACACACATAAATGATGTAATGCTGCGTCGCTATTCGAAAGCAAGATCAGCTGCTGGTGGTGGTAGTGGTTCTCTGAATGGAGACATTTCTAATAATTCTAAAACTCCTAATATGGAATTATATGAGAAGCGTGTTCAAGAATTGTCAAAACATATTGAAGAATCTAAAAAAAATGCTGATCAATTGCTTGAAGAATTACGTGTGAAGCAAAAACAAGAAGAGAAAATGCAAGAAGAATTGGATGACTTGAAAGAATCCTTAAAAGCCAATAAACAAAATTTGGATGCCGTTACAAGTGACCGTGATAGTCTTGTATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCTAGGATGGCCAAGTTAAATAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAAGTGACTCAAAAGCTTGAAGATGAGCTAAAAGTTTGTAAATATGAGCTGCTATCAGCCAACGAAACTATCGAAAGCTTGAAGAGTGAAAAATTGATTTTGGAACAGAAGTTATCTGCACTTGAAAAGAGGAATGCTGGAGAGATTAGTTCCCTTAAGTGGAAACTTGAGCAAGAACGCAAAGTTGTGAAGTCTGAAGCGTACGAGCTTGAAAGAAGGCTAGAAGGGTGTAGGCAAGAATTATTGACTGCTAAGGCTATCATTTCAGTCAAGGACTCTGAATTTGATGCATTGCAGAATAATTTGAAGGAGCTAGAAGAATTGAGAGAAATGAAAGAGGATATCGATAGAAAGAATGAACAGACAGCTGCCATACTGAAAATACAAGGGGCTCAATTAGCTGAAATGGAATCACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATAGAAGACATGAAGGGCAAGATCAGAGTTTACTGTCGACTAAGACCTCTTAGTGAAAAAGAGATTGTTGAGAAAGAAAGAGAAGTTCTTACTGCAGTTGATGAATTTACTGTTGAATACCCATGGAAAGATGAAAAACTGAAGCAGTACATATATGACCGAGTTTTTGATGCTAATGCAACTCAAGAAAGCGTATTTGAGGATACAAAGTATTTGGTGCAATCTGCTGTAGATGGTTATAATGTTTGCATATTTGCTTATGGTCAAACTGGATCTGGAAAGACATTTACAATCTATGGATCGGACATCAACCCTGGGCTTACTCCTCGTGCAATTGCAGAACTTTTCAGAATTTTAAGAAGAGATAATAACAAGTATTCTTTTTCCTTGAAGGCATACATGGTGGAGTTGTATCAGGATACCCTTATAGATCTGTTGTTACCAAAGAATGGAAAGCCTTTAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCTATTTCTACAATTGAAGAATTGAATAGTATAATACAAAGAGGATCTGAACGGCGACATATATCAGGAACCCAAATGAATGATGAAAGTTCAAGATCTCATCTCATTCTATCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAAAGGAAAGCTAAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACCGGGAGTCAGCTTAAGGAAGCTCAGAGCATTAACAAGTCATTATCAGCACTTGGAGATGTTATTAGCTCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAATTAACCATGTTAATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTCATGTTTGTGAATGTTTCTCCCGCAGAATCAAATTTGGATGAGACAAATAACTCTCTCATGTATGCCTCACGAGTGAGATCCATTGTGAATGACCCCAACAAAAATGTTTCCTCAAAAGAGGTAGCACGGCTGAAGAAGTTGGTTGCATATTGGAAACAACAAGCTGGTAGAACACTTGAGTATGATGATTTAGAAGAAATTCAAGATGAAAGACCAACTAAAGAGAATGGTAATGGCAATAGGTAA 3816 0.3802 MITDVPPSMTQNGRSSRYSFGSSNGNGDTPAQNGSAVINVDDYDSDSSNFAPSTPSTMSMAVPAELGGAVPLINRFQVDGFLKLMQKQIQSAGKHGFFSKRSVGPQVREKVTFEDMLSFQKDPIPTSLLKLNVDFVSRATKLFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQSLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIANGVATDSEIQVLALNTLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEITYDMSTTVANAVEELAGLIKLSTYSSFSLFECRKVVTGSKAPDLGNEEYIGLDANKYIGDLLAEFKAAKDRSKGEILHCKLIFKKKLFRESDEAVTEPMFVQLSYVQMQHDYILGNYPVGRDDAAQLSALQILAEIGFLSTPESCIDWNSLLERFLPRQISMTRAKREWEYDILSRYRSLENLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSAAGGGSGSLNGDISNNSKTPNMELYEKRVQELSKHIEESKKNADQLLEELRVKQKQEEKMQEELDDLKESLKANKQNLDAVTSDRDSLVSLCNEKDKELQAAILDKRNMESRMAKLNNAVIENTAKKDLANAGNRQVTQKLEDELKVCKYELLSANETIESLKSEKLILEQKLSALEKRNAGEISSLKWKLEQERKVVKSEAYELERRLEGCRQELLTAKAIISVKDSEFDALQNNLKELEELREMKEDIDRKNEQTAAILKIQGAQLAEMESLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLSEKEIVEKEREVLTAVDEFTVEYPWKDEKLKQYIYDRVFDANATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDINPGLTPRAIAELFRILRRDNNKYSFSLKAYMVELYQDTLIDLLLPKNGKPLKLDIKKDSTGMVVVENVTVMSISTIEELNSIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVAKGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALGDVISSLSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETNNSLMYASRVRSIVNDPNKNVSSKEVARLKKLVAYWKQQAGRTLEYDDLEEIQDERPTKENGNGNR* 1272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0906 1271 CDD KISc_C_terminal 895 1220 - -
Gso16g0906 1271 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 619 1271 - -
Gso16g0906 1271 Coils Coil 624 686 - -
Gso16g0906 1271 Gene3D - 282 386 - -
Gso16g0906 1271 Gene3D - 501 609 IPR011993 -
Gso16g0906 1271 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Gso16g0906 1271 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Gso16g0906 1271 Gene3D MyTH4 domain 98 280 IPR038185 -
Gso16g0906 1271 Gene3D - 1221 1268 - -
Gso16g0906 1271 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 897 1245 IPR027417 -
Gso16g0906 1271 ProSiteProfiles Kinesin motor domain profile. 897 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 SUPERFAMILY PH domain-like 503 591 - -
Gso16g0906 1271 Coils Coil 825 862 - -
Gso16g0906 1271 Pfam Kinesin motor domain 903 1218 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 CDD FERM_B-lobe 398 496 IPR019748 -
Gso16g0906 1271 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Gso16g0906 1271 PRINTS Kinesin heavy chain signature 969 990 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 PRINTS Kinesin heavy chain signature 1088 1105 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 PRINTS Kinesin heavy chain signature 1119 1137 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 PRINTS Kinesin heavy chain signature 1168 1189 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 Coils Coil 701 721 - -
Gso16g0906 1271 Pfam FERM central domain 389 503 IPR019748 -
Gso16g0906 1271 PANTHER KINESIN-RELATED 619 1271 IPR027640 GO:0003777|GO:0007018
Gso16g0906 1271 ProSitePatterns Kinesin motor domain signature. 1118 1129 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso16g0906 1271 SMART kinesin_4 895 1226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g0906 1271 CDD FERM_C_KCBP 500 608 - -
Gso16g0906 1271 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Gso16g0906 1271 SMART B41_5 279 503 IPR019749 -
Gso16g0906 1271 Coils Coil 754 781 - -
Gso16g0906 1271 Gene3D Kinesin motor domain 884 1220 IPR036961 -
Gso16g0906 1271 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Gso16g0906 1271 Gene3D - 395 496 IPR014352 -
Gso16g0906 1271 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0906 Gso-Chr16 24456313 24466719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0906 53 1268 Calmodulin-binding Proteins AT5G65930 72.906 0.0 1797
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0906 - - gmx:100810661 2396.31