Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0895 ATGGAACTCAGCACGATGTTGTTCTTGTTTGTTTCTTTCCTAACCATTCTTTTCTCTAAATCACTCATTAAATTTTTCTTCTCTTCCAAAGGTAGACAATTGCCACTTCCTCCTGGGACCATGGGTTGGCCTTACATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAATGTTTTCTTTGCCACAAAAATCAAGAGGTATGGCTCTATATTCAAGTCACACATTTTGGGTTATCCTTGTGTGATGATTTCTGACCCGGAAGCAGCAAAGTTTGTACTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCTAGCAAAGAGAGGATGTTGGGGAAGCAAGCAATTTTCTTTCACCAAGGAGCATACCATGCTAATCTTAGAAGGCTTGTTCTTCGCACCTTCAGGCCTGAGGTCATCAAAGACAAAGTCTCATACATTGAATCCATTGCCCAAAGTTGCCTCAAATCATGGGAAGGAAAAATGATCACAACTTTCCTTGAAATGAAAACCTTTACCTTCAATGTGGCCCTGCTTTCAATTTTTGGAAAAGATGAGAATCTCTATGGGGAGGATCTGAAGCGATGCTACTACACCCTCGAGAGAGGGTACAATTCAATGCCTATAAACCTTCCAGGAACACTGTTCCACAAGGCCATGAAGGCAAGGAAAGAGCTTGCACAGATCTTGGCTCAAATCATCTCAACAAGGAGGAATATGAAGCAAGATCACAATGACTTGTTGGGCTCGTTCATGAGTGAAGAAGCAGGACTCAGTGATGAGCAAATAGCAGATAACATCATTGGTCTTATTTTTGCTGCTCGCGACACCACTGCCACCGTACTTACGTGGATTGTTAAGTACCTTGGTGAAAACACCAGTGTCCTAGAAGCAGTAACTGAAGAGCAAGAGTCGATATTAAGGGCCAAGGAAGAAAGTGGAGAAGAAATGGGTTTGAATTGGTCAGACACAAAAAATATGCCAGTGACATCCAGGGTCATACAAGAGACTCTAAGAATTGCATCAATTTTATCTTTTACATTCAGAGAAGCTGTAGAGGATGTTGAATTTCAAGGGTATCTCATACCAAAAGGGTGGAAAGTATTACCACTTTTTAGAAACATCCACCATAGTCCTGACAACTTCAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTTGCTCTAAAACCCAATACTTTTATGCCATTTGGCAATGGGACCCATGCATGTCCTGGCAATGAATTAGCTAAGTTGGAGATTTTGGTGTTTCTACATCACCTCACCACAGAATACAGGTGGTCTTTGATCGGAGCAAAAAATGGGGTTCAATATGGCCCTTTTGCGCTTCCACAAAATGGATTGCGCATCACACTATATCCCAAGAAATAA 1398 0.4142 MELSTMLFLFVSFLTILFSKSLIKFFFSSKGRQLPLPPGTMGWPYIGETFQMYSQDPNVFFATKIKRYGSIFKSHILGYPCVMISDPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGAYHANLRRLVLRTFRPEVIKDKVSYIESIAQSCLKSWEGKMITTFLEMKTFTFNVALLSIFGKDENLYGEDLKRCYYTLERGYNSMPINLPGTLFHKAMKARKELAQILAQIISTRRNMKQDHNDLLGSFMSEEAGLSDEQIADNIIGLIFAARDTTATVLTWIVKYLGENTSVLEAVTEEQESILRAKEESGEEMGLNWSDTKNMPVTSRVIQETLRIASILSFTFREAVEDVEFQGYLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVALKPNTFMPFGNGTHACPGNELAKLEILVFLHHLTTEYRWSLIGAKNGVQYGPFALPQNGLRITLYPKK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0895 465 Pfam Cytochrome P450 37 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PANTHER CYTOCHROME P450 26 12 462 - -
Gso16g0895 465 SUPERFAMILY Cytochrome P450 32 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS P450 superfamily signature 333 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Gso16g0895 465 Gene3D Cytochrome P450 27 463 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 332 350 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 372 396 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0895 465 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0895 Gso-Chr16 23426093 23429109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0895 1 455 Cytochrome P450 AT4G19230 71.522 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0895 K09843 - gmx:100807446 927.161