Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0881 ATGGAGAGTGCAAGAATCAGCCAATGGTTAAATCTTCTTGTTTGTGTACTGCTATTGCTCAAGGCAGAAGGATCTTTAGTTCCATTGATTTTGGTCGAGAATGCAGAATCAAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGATTTGGGGAAGGTATTAATAGCTGGATTGTTCACATTGAGGGAGGAGGATGGTGCAACAATATCGAGAGTTGCCTTGACCGTAAGGACACTCGCTTAGGTTCATCTAAGCAAATGGAGGATATTTACTTTTCTGGAATTTTAAGCAATGAGCAACAGTTTAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGTTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCCAACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATAGAAGAATTACTAGCAAAAGGATTGGAAAGGGCTGAAAATGCTATTCTCTCTGGCTGTTCAGCTGGAGGATTGACAACTATATTACACTGTGATAGCTTTAAAACTTTTTTGCCCTCTAGAGCTAATGTGAAATGTGTTCCAGATGCTGGTTATTTTGTCAATGTAGAGGATATCTCGGGAGCACATTTCATTCAACAGTACTACAGTGAAGTTGTTTCAACACATGGTTCTGCAAAGAATTTGCCCACATCCTGCACTTCAAAACTCAGCCCAACACTATGCTTTTTTCCACAATATGTGGCATCACATATCAGTACCCCAATCTTCGTTGTTAATTCAGCCTATGACTCGTGGCAGATTCGATACATCTTTGTACCTGGCTCTGCTGATCCCAGTGATAGTTGGAATAGCTGCAAGGTTAATATGAGCAACTGCTCGCCTGATCAACTAAGTAAATTGCAAGGCTTCAAGAGTGAATTCGAAAGGGCATTGAGTGAGGTAGGAGATTCTCCATCTAAAGGAATGTTTATTGACTCTTGCTATGCCCACTGCCAAACAGAACCACAGGAGACATGGTTTAAGACTGACTCTCCAAAGCTTGCCAATACAACTATTGCCAAGGCAGTGGCAGACTGGTTTTATGGTCGAAGTTCTTTCCGCCATGTGGATTGCAATTATCCTTGCAACCCTTCTTGCCAGAACCGTGTTTTTGATCTAAAAGACCTCCCTGGAATATAG 1197 0.4152 MESARISQWLNLLVCVLLLLKAEGSLVPLILVENAESKGAVCLDGSPPAYHFDKGFGEGINSWIVHIEGGGWCNNIESCLDRKDTRLGSSKQMEDIYFSGILSNEQQFNPDFYNWNRVKVRYCDGSSFTGDVEEVDPTTNLHFRGARIFSAVIEELLAKGLERAENAILSGCSAGGLTTILHCDSFKTFLPSRANVKCVPDAGYFVNVEDISGAHFIQQYYSEVVSTHGSAKNLPTSCTSKLSPTLCFFPQYVASHISTPIFVVNSAYDSWQIRYIFVPGSADPSDSWNSCKVNMSNCSPDQLSKLQGFKSEFERALSEVGDSPSKGMFIDSCYAHCQTEPQETWFKTDSPKLANTTIAKAVADWFYGRSSFRHVDCNYPCNPSCQNRVFDLKDLPGI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0881 398 PANTHER NOTUM-RELATED 3 393 IPR004963 GO:0016787
Gso16g0881 398 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Gso16g0881 398 PANTHER PECTIN ACETYLESTERASE 3 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0881 Gso-Chr16 21853967 21858130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0881 5 398 Carbohydrate Esterase AT4G19420 55.581 0.0 524
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0881 K19882 - gmx:100780171 823.157