Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0880 ATGGAGAGTGCAAGAATCAGCAAATGGTTAAATCTTCTAGTTTGTGTACTGCTATTGCTTAAGGCAGAAGGATCTCTTGTTCCATTGACTTTGGTGAAGAATGCAGAATCAAAAGGAGCTGTTTGTTTGGATGGAAGCCCCCCAGCATACCACTTTGACAACGGATTTGAAGAAGGGATTAAGAACTGGATTGTTCACATTGAGGGAGGAGGATGGTGCAACAATGTAGAGAGTTGCCTTTACCGTAAGGATAGTCGCTTAGGTTCATCTAAGCAAATGGAGGATCTTTACTTTTCTGCAATTTTAAGCAACGAACAAGAGTATAATCCAGATTTCTACAATTGGAATAGAGTCAAGGTTAGGTACTGTGATGGGTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCAAACAACCAATTTGCACTTCAGAGGAGCAAGGATTTTTTCAGCTGTAATGGAAGAATTACTAGCAAAAGGATTGGAAAAGGCTGAAAATGCTATTCTCTCTGGCTGTTCAGCTGGAGGACTGACTACAATATTACACTGTGATCGCTTTAAAAATCTGTTGCCTTCTGAAGCTAATGTGAAATGTGTTCCAGATGCTGGTTATTTTGTCAATGTAGAGGATATCTCAGGAACACATTTCATCGAAAAGTTCTACAGTGAAGTTGTTTCAACTCATGGCTCAGCAAAGAATTTGCCCTCATCCTGCACTTCAAAATTCAGCCCAGAACTATGCTTTTTCCCACAATATGTGGCATCACATATCAGTACTCCAATCTTCGTTGTAAATGCAGCCTATGACTCATGGCAGATTCAGAACATCTTTGTACCTGGCTCTGCTGATCCCAGTGACAGTTGGCATAGCTGCAAGCTTGATATAAGCAACTGCTCACCTGATCAACTAAGTAAAATGCAAGACTTCAAGTCGGAATTCGAAAAGGCTGTGAGTGTGGTAGGCGACTCTTCATCTAAAGGAATGTTCATAGACTCTTGCTATGCTCACTGCCAAACAGAATCACAGGAGACATGGTATAAGAGTGACTCTCCACAGCTTGCCAATACGACTATTGCCAAGGCAGTGGGAGACTGGTTTTATGGTCGAAGTTCTTTCCGTCACGTGGATTGCAATTATCCTTGCAACCCTTCTTGCCAGAACCGTGTTTTTGATCTAAAAGACCACCCTGGAATATAG 1197 0.4169 MESARISKWLNLLVCVLLLLKAEGSLVPLTLVKNAESKGAVCLDGSPPAYHFDNGFEEGIKNWIVHIEGGGWCNNVESCLYRKDSRLGSSKQMEDLYFSAILSNEQEYNPDFYNWNRVKVRYCDGSSFTGDVEEVDQTTNLHFRGARIFSAVMEELLAKGLEKAENAILSGCSAGGLTTILHCDRFKNLLPSEANVKCVPDAGYFVNVEDISGTHFIEKFYSEVVSTHGSAKNLPSSCTSKFSPELCFFPQYVASHISTPIFVVNAAYDSWQIQNIFVPGSADPSDSWHSCKLDISNCSPDQLSKMQDFKSEFEKAVSVVGDSSSKGMFIDSCYAHCQTESQETWYKSDSPQLANTTIAKAVGDWFYGRSSFRHVDCNYPCNPSCQNRVFDLKDHPGI* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0880 398 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Gso16g0880 398 PANTHER PECTIN ACETYLESTERASE 3 393 - -
Gso16g0880 398 PANTHER NOTUM-RELATED 3 393 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0880 Gso-Chr16 21811143 21815574 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0880 5 398 Carbohydrate Esterase AT4G19420 56.977 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0880 K19882 - gmx:100780707 818.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0880 16 21811143 21815574 Gso1g1292 1 49360772 49368678 PCT
Gso16g0880 16 21811143 21815574 Gso9g1791 9 42366392 42373718 PCT