Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0878 ATGGAGATCACTAGAATATGCCAATGGTTAAGTCTTCTGATATGTGTACTACTATTACTGCAGACAGAAGGGGTTCCTGTGGGAATCACTTTTGTTGAAAATGCAGTGGCAAAAGGGGCTGTTTGTTTGGATGGGAGTCCTCCAGCTTACCACTTCAACAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTACTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACATCACTTTCCTTTTCTGGGTTTTTCAGTAACAGTAAAAAGTTCAATCCAGATTTCTATGATTGGAACAGAATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCGAAAACCAATTTGCACTTCAGAGGAGCAAGGGTTTTTGCTGTGGTCGTTGAGGATTTATTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCCGGATGTTCAGCTGGAGGATTGGCTTCTATTCTAAATTGCGATCGATTCAAATCACTACTACCTGCAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTTTTTTATCAATGTAAAGGATGTCTCTGGAGCACAGCGCATTGAAGAGTTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCAAAGAATTTGCCTACATCGTGCACTTCAAGACTCAGACCAGGGCTGTGCTTTTTCCCTCAAAATGTCGTGTCCCAAATCAGTACCCCAATCTTCTTTGTAAATGCAGCCTATGACTCATGGCAGATAAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCATGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGTTCACCTAATCAACTCAGTGTAATGCAAGGATTCAGGACAGATTTCTTAAGGGCATTTAGTGTGGTTGGCAACGGCGCATCTAAAGGGCATTTTATAGATGGTTGCTATGCACACTGCCAAACTGGAATACAAGAGACATGGCTGAGAAATGACTCCCCAGTGGTGGCCAAGACATCAATTGCAAAGGCAGTGGGTGATTGGTTTTATGATCGAAGGCCCTTCCGTGAGATAGATTGTGCCTACCCTTGCAACCCTACTTGCCATAATCGTATTTTTGATCAGAATGAGCGTCCAGATGTATAG 1200 0.4275 MEITRICQWLSLLICVLLLLQTEGVPVGITFVENAVAKGAVCLDGSPPAYHFNKGSGAGINNWIVHFEGGGWCNNVTTCLSRRDTRLGSSKKMDTSLSFSGFFSNSKKFNPDFYDWNRIKVRYCDGSSFTGDVEAVDPKTNLHFRGARVFAVVVEDLLAKGMKNAQNAIISGCSAGGLASILNCDRFKSLLPATTKVKCLADAGFFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPTSCTSRLRPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGQWRECKLDIKNCSPNQLSVMQGFRTDFLRAFSVVGNGASKGHFIDGCYAHCQTGIQETWLRNDSPVVAKTSIAKAVGDWFYDRRPFREIDCAYPCNPTCHNRIFDQNERPDV* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0878 399 PANTHER PECTIN ACETYLESTERASE 3 394 - -
Gso16g0878 399 Pfam Pectinacetylesterase 21 371 IPR004963 GO:0016787
Gso16g0878 399 PANTHER NOTUM-RELATED 3 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0878 Gso-Chr16 21736457 21742821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0878 5 399 Carbohydrate Esterase AT4G19420 59.767 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0878 K19882 - gmx:100781246 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1292 1 49360772 49368678 Gso16g0878 16 21736457 21742821 PCT
Gso9g1791 9 42366392 42373718 Gso16g0878 16 21736457 21742821 PCT