Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0876 ATGCGGCCACGCAGGGAAACAGAGAAGCGCAGATTCGATTTCGACTCAGCCAACACCAACAACTCAGCCTCCTCCTCCCCCAAATCACCGCGGCGAAGGCCGAAGCTCTTGGCGGTGCTGATGGCGGGGCAGTCGCGGAAATGGATGATCCTGGTGGCCACGATTTGGATTCAGGCCTTCACGGGGACCAATTTCGATTTCTCCCAGTACTCGTCGTCGCTCAAATTCGCGCTTAACGTGTCGCAGGTGCAGCTGAACTATCTCGCCACGGCGAACGACATGGGGAAGGTTTTCGGGTGGTCCTCGGGGATTGCCCTAATGCACCTTCCGGTTTCTGTTGTTATGTTTGTTGCGGCTTTCATGGGGTTCTTCGGGTACGGCCTCCAGTGGCTCGTCATCACCGGCGTCGTCAATTTGCCTTATTTTCTGGTCTTTCTTCTGTGCCTTTTAGGGGGATGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTTCCGGTTAACCGAGCCCTTGCATTATCGCTCACTGTGAGTTTCAATGGCATTAGTGCAGCACTCTACACCCTTGTTGCCAATTCAATTGATCCATCATCGGATGCACTGTATCTGCTATTGAATGCTCTTGTTCCCCTTCTCATTTGCATTGCAGTACTTGTCCCTATTCTTAACCAACCAGCTTTAGACCCTCTCCCTCCTGATGCAGTAAACCGGGACTCAGTGATATTTCTAATATTGAACTTTATAGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCATCTGCTTCTGGTGTGACTTCTGCTCGGTTCTATTTTGGTGGAGCTATTTTCCTCCTCATCTTCCCATTATGTATTCCTGGCATTGTATATGCTCGGGCTTGGTTTCGGCATACCATCCATTCCAGCTTTCAGATGGAAAGCTCTAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAAAGAGCTCCATAGCCGTCAAAATAGTATTGTTAGCAATGGAGATACTTACAGCCTGCTAAGCAACAATGGATACATGTTTGGGAGCCAAAGGGAAAAAGATAGTGATCCGTGTTGTGAGACGATGATTGGGCAGGATCAGTTAGCAGTGCTAGGAGAAGAGCACTCAGTTGCAGTAGTTGTCCGCAGATTGGATTTTTGGTTATACTATGCTACATACTTCTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTGGGACAGATTGCACAATCTGTGGGCCAGAGTTCAAATACTTCTACACTTGTCATGCTCTATGCATCCTTTTCCTTTTTTGGTCGCTTGCTTTCAGCTGGACCAGACTACATTCGGAATAAGATCTACTTTGCAAGGACTGGTTGGCTATCAATTGCACTTATACCAACCCCAGTTGCGTTCTTCCTCCTTGCTGCATCAGACAGTCTTCTGGCACTTCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTTGCAGCTGCTGTGTCAGTTACATCTGAGTTGTTTGGACCTAACAGTGTGGGCGTCAATCACAACATTCTCATAACAAATATCCCTATTGGATCTCTTCTCTATGGCTTTCTTGCTGCACTAGTTTATGATGCTAATGCACCCTCAATGCCAGGAAACTTGATAACGTCTGACTCAGTAGTGTGCATGGGAAGGCAGTGTTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGCTTCAAGCATGCTATTGTTCTTAAGAACCAAACATGCATATGATCATTTTGAGAAGAACCGTATTTCAACTCAATCAATTGTGTCTTAA 1839 0.4622 MRPRRETEKRRFDFDSANTNNSASSSPKSPRRRPKLLAVLMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKFALNVSQVQLNYLATANDMGKVFGWSSGIALMHLPVSVVMFVAAFMGFFGYGLQWLVITGVVNLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGISAALYTLVANSIDPSSDALYLLLNALVPLLICIAVLVPILNQPALDPLPPDAVNRDSVIFLILNFIALLTGLYLLLFGSSASGVTSARFYFGGAIFLLIFPLCIPGIVYARAWFRHTIHSSFQMESSSFILVHDDDLEMHKELHSRQNSIVSNGDTYSLLSNNGYMFGSQREKDSDPCCETMIGQDQLAVLGEEHSVAVVVRRLDFWLYYATYFCGGTLGLVYSNNLGQIAQSVGQSSNTSTLVMLYASFSFFGRLLSAGPDYIRNKIYFARTGWLSIALIPTPVAFFLLAASDSLLALQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDANAPSMPGNLITSDSVVCMGRQCYFWTFVWWGCISVLGLASSMLLFLRTKHAYDHFEKNRISTQSIVS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0876 612 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 612 - -
Gso16g0876 612 SUPERFAMILY MFS general substrate transporter 32 228 IPR036259 -
Gso16g0876 612 MobiDBLite consensus disorder prediction 1 31 - -
Gso16g0876 612 MobiDBLite consensus disorder prediction 1 15 - -
Gso16g0876 612 SUPERFAMILY MFS general substrate transporter 258 595 IPR036259 -
Gso16g0876 612 Gene3D MFS general substrate transporter like domains 4 225 IPR036259 -
Gso16g0876 612 Pfam Nodulin-like 47 292 IPR010658 -
Gso16g0876 612 PANTHER NODULIN-LIKE/MFS TRANSPORTER 29 612 - -
Gso16g0876 612 Gene3D MFS general substrate transporter like domains 387 601 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0876 Gso-Chr16 21638018 21643296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0876 1 609 Nodulin-like Gene Family AT1G31470 56.564 0.0 621
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0876 - - gmx:100803546 1155.97