Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0864 ATGGAGAAAACAAGGTCCTCAGACCAAGTTGTTGTCTTCCTCGACCAGCATAACCCTAAACCACCCTCCATGGAATCCGAAAACCATCAGGACAAACCCAAACATCCCTTAAAAGTCAGAGCTCTTAACCGTCTCAGCTTCTCAAAACCCAAATCCCGAATCCTAGAATACAACTATAATGTCCCCCGCAACAAAGTTGCTGAAGAGAGTGACATTATTCAACCCACCTATAAGTTCTCTTCCAACGATGACGATGACGATGACGACGATAACGATTTGGATTTGGAATGGGATGAGGATGAGACCGAGGAGGATGGCTCGGAGCATGGCCCAAAGTTGCACCAAAAGAGGAAGTTCAAAATCAAGTGGAGGCTCATGATGGAGTGGATTTTGTTCCTCAACATATTGACATGCTTGGTGTGTTCTTTGACCATATCTTCCATAACGAACATGCACCTTTTGGGATTGGAGATTTGGAGGTGGTGTGTGATGGCAATGGTCACGTTCAGTGGCCGTTTGGTTTCTGGGTGGGTGGTAGGTCTAACGGTGTTCATCCTCGAGCGAAACTTCATGCTCCGAGAGAAGGTGCTGTACTTCATCTACGGACTCCGAAACAGCATAAGAAACTGCATGTGGCTAGGCCTGGTGCTACTCTCCTACTGGAGCATGGTGTTCAACGACGTCCAAAAGAAGAACCACAAGTTCCTCAACAAGGTCTTCCAAGCCCTAGTAGCAGTGTTAGTGGGCGCTACCATCTGGCTCGTGAAGATCGTGCTGGTGAAGATGCTCGCGTCCTCGTTCCACGTCACCACCTACTTCGACAGAATGAAGGAGAGCGTCTTCCATCACTACATTCTCGAGACCCTCTCGGGTCCTCCGATGGAAGACGCCGAGGAGGTGCTGCGGCAGCACCACCTCGCGGGATCGAAGTCGATGCCCGCGAGGTGGAATGCCAAGAACTTGTACAAGTCCAAGAGGTTCGGATCGAGGAAGATTGATATGGAGAAGCTGAGGAAGCTGAGCATGGAGAGCACCGCTACAGCGTGGAGCGTGAAGAGGCTTGTTAACTATGTTAGGTCTTCCGGCTTGTCCACTATTTCGAGGACTGTGGATGATTTTGGCAACGCGGAGTCTGAGATTAGTAGTGAGTGGGAGGCTAGGAACTGTGCTCAGAGGATTTTCAAGAACGTTGCCAAACCTGGCGCCAAGTATATTGAAGAGGAGGATCTCATGAGATTTTTGAAGAGGGTTGAGATACATACCATATTTCCACTCTTTGAAGGAGCACTTGAAACGGGACAGATCAGCAGGTCTTCATTTAGAAATTGGGTGATTCGAGCTTATTATGAACGAAAAGCTCTAGCACAATCACTGAATGATACCAAAACAGCAGTGCAACAGCTTCACAAAATAGCAAGCGCAGTTGTTAGTGTGATAATAATCATTGTGATGCTTTTGCTGATGGAGATGGCAACGATCAAGATAATATTATTCTGTATTACACAGTTTGTTTTGATAGGTGTTGCCTTCCAAGGTACTTGCAAGACTGTGTTGGAGGCCATCATCTTTGTCTTCGTCATGCACCCTTTTGATATTGGAGACCGCTGCGTTATTGATGGAGTTCATATGATTGTGGAAGAGATGAATATCTTGACAACTGTATTTCTTCGATATGACAATGAGAAAATATACTACCCTAATGCAGTTTTACTCTCTAAGCCTATAAGCAATTTCTATAGGAGCCCAGAGATGTGGGATTCAATTGATTTCACCATTGATGTTTCAACTTCTATGGAGACCATCCTTGCACTCAAGAAATCAATACAAATGTACATTGAGAGCAAGCCAAAGTATTGGAATCCAAAACACAGCATGATAGCAAAAGGAATTGAGAATATGGACAAGCTAAAGCTGTGCTTATCTGTGCAACATACCATCAACCATCAGAACTACGGTGAGCGAAACATTAGGATAACGGAACTTCTCTTGGAATTGAAGAGGATCTTTGAGATCCATGGTGTCAAGTACCATCTTCTTCCTCAGGAGATCCAGATTACCCATATGAATATTGAACATAGCAAAGTTCTGTTTCAATCATGA 2100 0.4514 MEKTRSSDQVVVFLDQHNPKPPSMESENHQDKPKHPLKVRALNRLSFSKPKSRILEYNYNVPRNKVAEESDIIQPTYKFSSNDDDDDDDDNDLDLEWDEDETEEDGSEHGPKLHQKRKFKIKWRLMMEWILFLNILTCLVCSLTISSITNMHLLGLEIWRWCVMAMVTFSGRLVSGWVVGLTVFILERNFMLREKVLYFIYGLRNSIRNCMWLGLVLLSYWSMVFNDVQKKNHKFLNKVFQALVAVLVGATIWLVKIVLVKMLASSFHVTTYFDRMKESVFHHYILETLSGPPMEDAEEVLRQHHLAGSKSMPARWNAKNLYKSKRFGSRKIDMEKLRKLSMESTATAWSVKRLVNYVRSSGLSTISRTVDDFGNAESEISSEWEARNCAQRIFKNVAKPGAKYIEEEDLMRFLKRVEIHTIFPLFEGALETGQISRSSFRNWVIRAYYERKALAQSLNDTKTAVQQLHKIASAVVSVIIIIVMLLLMEMATIKIILFCITQFVLIGVAFQGTCKTVLEAIIFVFVMHPFDIGDRCVIDGVHMIVEEMNILTTVFLRYDNEKIYYPNAVLLSKPISNFYRSPEMWDSIDFTIDVSTSMETILALKKSIQMYIESKPKYWNPKHSMIAKGIENMDKLKLCLSVQHTINHQNYGERNIRITELLLELKRIFEIHGVKYHLLPQEIQITHMNIEHSKVLFQS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0864 699 MobiDBLite consensus disorder prediction 22 38 - -
Gso16g0864 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 4 697 IPR016688 -
Gso16g0864 699 SUPERFAMILY Sm-like ribonucleoproteins 520 578 IPR010920 -
Gso16g0864 699 PIRSF Memb_At2g17000 3 698 IPR016688 -
Gso16g0864 699 MobiDBLite consensus disorder prediction 1 39 - -
Gso16g0864 699 Gene3D - 529 578 IPR023408 -
Gso16g0864 699 Pfam Mechanosensitive ion channel 470 675 IPR006685 GO:0016020|GO:0055085
Gso16g0864 699 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 4 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0864 Gso-Chr16 21197367 21205221 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0864 20 689 Mechanosensitive Ion Channel Family AT5G12080 43.804 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0864 K22048 - gmx:100813521 1347.41