Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0863 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGGAAAATGAATCATGCAAATATTGTGAAGCTGAAGGAAGTTATACGAGAATGTGACACTCTGTGCCTTGTTTTTGAGTACATGGAATACAACCTGTATCAACTTGTGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTTAAGCCTGAAAACTTGCTGGTCACCAAGGGTGTCATCAAGATTGCTGATTTTGGCCTAGCCCGGGAGATCAGTTCACAACCACCATATACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCCCATCTATATAGCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTCACTCTGCGTCCTCTATTCCCTGGTTCCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTGATAGGTAGTCCAACCACTGAATCTTGGGCAGATGGACTCAAACTTGCCAGGGATATCAACTATCAGTTTCCACAGCTTGCTAGTGTACATCTCTCTACACTGATCCCATCCAGAAGTGATGATGCAATCAGCCTTGTGACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAGCAGAGGCTCTTCAACATCCTTTCTTTCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAGAGCTGTAACCAGAACTCCACCATCTGCTGGGACCAGGGGATCACTGGATCGGCAGGGCCTCAAGAGATACTCTGGTGCTTTGCCTAATACAAAAATCACCAACAATTTTAGTTCCCCGAAATTACAAGCTTCTATAGCTTCAGGTGTGCAAAGGAAGCTGGATATGGCAAATGAGGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATCGATTACCAGGAAAAGGCAGCCCAACTTCTATAAACAAGGGGAGGACTGCTCGTGGGGTTTCAGAAACAGCTGAGAAGTTGGCTAATATGTCGATTGGTACTCGAAGACAATCCTTAGGACAAACCCGTCCGCCTCCCATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAATTTCATGCTCAGGTCCGGACAACAAATTCCATCTGAAAGAAGTTTGACAAGAAAAGTTGCCGGGTGA 1356 0.4344 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHANIVKLKEVIRECDTLCLVFEYMEYNLYQLVKNREKLFSENEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKGVIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHLYSSKVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQLASVHLSTLIPSRSDDAISLVTSLCSWDPCKRPTAAEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGSLDRQGLKRYSGALPNTKITNNFSSPKLQASIASGVQRKLDMANEDGIKSKKSLKTTQQSKYRLPGKGSPTSINKGRTARGVSETAEKLANMSIGTRRQSLGQTRPPPMKAGVNWISESGNFMLRSGQQIPSERSLTRKVAG* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0863 451 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0863 451 CDD STKc_MAK_like 4 283 - -
Gso16g0863 451 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gso16g0863 451 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 404 - -
Gso16g0863 451 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Gso16g0863 451 MobiDBLite consensus disorder prediction 353 392 - -
Gso16g0863 451 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0863 451 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Gso16g0863 451 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0863 451 MobiDBLite consensus disorder prediction 362 388 - -
Gso16g0863 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gso16g0863 451 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 404 - -
Gso16g0863 451 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0863 Gso-Chr16 21143221 21150953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0863 1 290 Core Cell Cycle Gene Families AT3G48750 36.700 3.96e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gso16g0863 Pkinase 3.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0863 K08829 - gmx:100784474 902.894