Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0862 ATGTTTACGTGCATAGCGTGTACGAAGACGGATGATAAGGATGAAGAAGGAGGATCTCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCATACAAGCAATGCAAACCATGCACAGGGTCCAGTAGCTACAAAAAAGGACATAGGCCATATCCAGATTTTGATACCATCTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACCCCTGCATGGGACTTCACAACCTCTCACTACCCTGGTGGAAGATCTGACCCTAGATTTGCTGGGGCATATGGCGGTGACCGCACCCCGAGAGGACGTGACTCATCATCAGTTTGTGATGTAGTCTTAGAGGATGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAACGGAGGAAATGATCTTAAGAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTACAACGTCCAGAGATTTAATAAACAAGCTCTTAACACTCCTCCAAGGTCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCAAGGGAAAGCCCCATGGCCTCAAACAAGGATTGGACGCCGAGGAGTCACTATAAGCCCTCTGGGAGCAGAGGATATTACCCGTCCGAACCGTTGGATCACGGTGGAGGCAGTGGCCAATACCATGCAGGGCCATCTATGGAACCAGCAAGGGATACCACTGCTTCTAGAGATGAGCCTTCTATCAGCAATGCCAGTGAAATGGAGACAGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCAGGCAGTTAGCTGATGGAACTAGGGAGCTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAGAACAGAGAGAGAATCCAAGCTCAATATCTTTGA 1050 0.4771 MFTCIACTKTDDKDEEGGSRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPGGRSDPRFAGAYGGDRTPRGRDSSSVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNKQALNTPPRSEDEQRDSSYSRLTSARESPMASNKDWTPRSHYKPSGSRGYYPSEPLDHGGGSGQYHAGPSMEPARDTTASRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0862 349 ProSiteProfiles BRX domain profile. 294 349 IPR013591 -
Gso16g0862 349 MobiDBLite consensus disorder prediction 204 298 - -
Gso16g0862 349 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Gso16g0862 349 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 349 - -
Gso16g0862 349 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Gso16g0862 349 Pfam Transcription factor regulating root and shoot growth via Pin3 293 348 IPR013591 -
Gso16g0862 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 349 IPR044532 -
Gso16g0862 349 MobiDBLite consensus disorder prediction 9 30 - -
Gso16g0862 349 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Gso16g0862 349 MobiDBLite consensus disorder prediction 221 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0862 Gso-Chr16 21132651 21141120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0862 1 349 Major Intrinsic Protein MIP AT1G31880 69.638 9.30e-174 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0862 - - gmx:100785003 724.161