Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0839 ATGGATGGGGTCGCACGTGCGGTGGAGCAGGCTCAGTCATCATCGGGCTTGGCCTCGGGGTGGCGTCCCCGCGGCTCCGTGTTCTCTCCTTGTAAGCCTAAGGGCGAAGAAGAAGCTTCTGCTGCTGCTGGGAAGAAGCCGCAGCAACCGTTGCACGTGGTTGTGAGGAAACCTTTGGTGGCTAGATTGACCAAGGAAATAGTTGAAACATACCAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCGTCTGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCGGATCTGATTTTGACAGTGAATTTTGTCTTGATCCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCACGGGACATTTGGACAAGTGGCTAAATGCTGGGATTCAGATACCAACAGTTTTGTTGCTGTGAAGATCATTAAAAATCAACCTGCATACTATCAACAGGCGCTGGTTGAAGTAACTATTTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGACATTTGTGCATTTGCTTTGAATTGCTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCACTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATATGGACTGGCTCTACTAAAAGAGGCTGGCATTATTCATTGTGATCTGAAGCCAGAAAACATTCTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATCATTGACTTTGGATCAGCATGCATGGAAAACCGCACCGTTTACTCTTATATTCAGAGTCGATACTATAGGTCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCCGGGGCTTCAGAATTTGATCTTTTGAAAAGGATGATTGAAATACTTGGTGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACACAAGTAAGTTCTTCAAGTGTATTGGGAGTCTCCAGAACATTGAGAGCAGTGAGAGTTCTAAAAATGGAAGAAGTGTTTATCAAACATTGACAGTGGAAGAATATGAAGCTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCAGTTGAACCTTGAAGCAATTGTTACAAATTATCCCTACAGAAAAAACCTACCTAAAGAAGATATTCTCAAAGAAAGTCAAATACGACTGGCTCTTGTAGATTTTCTGAAAGGGCTTGTTGAATTTGATCCTGCAAAACGCTGGTCACCCTTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACACCCTTACAAGCCTCCTCCTGAGACTCCTCATATGCCAGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCCGCTGGTCTATCACCTAATGTTTCAGGCAAAAGCAGAGCTTCCCTTTATAGCAGTCCACATTTTCAGATGGTTCAACATCCGCCTGCCAATAGTTATGGCAGTGTAGGAAGTCATGGGAGCTATAATGATAGTGTTGGGCTTGGAAGCAGCTATGGAAGTTACGGAGAGAGCAGTAACATGTTTGCTTACTATTCACCTATTGGTCCATCTGGTATGAACATGCACAATCAGGGAAGTATGTCAATGCTTGGGAATAGTCCGGATGCAAGGAGGAGAGTTAAGTACCAACCTGGGAATGGGCTGGGGATAAGTCCGTCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCATCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTCAGTTCTCCAGGACACTATGGACCTACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAGTTAGCCAGTTTAATAGAAGAAAAAATTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACATTTTCTTCACATTGGCCAGGTCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAAGCTCTTGGCAGTTCACCATCATACCTACAGTCAAATAGTAATCCTGGAAACTGGAAGCAGCGAGGAAGTGGAGGGTTATCTGCTAATCAGAACATTTCATCCTTAATGAAGCCCAGTGCTAGTATGAACCCACAATCAACAGAAGTGGTTCATGACAATGCGGAGACAGGCATTTCTTTGCCTGATCCTGGTGATTGGGACCCTAATTATAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCAGTTTGACAACTGAGTTTGGCAGAAGTATGAATCTTGGTTCTACTGAAACATGGGCTGGATTTGGAAGGTTCAATCATGTTTCCAGCACAAGCACTCCAATAATCATGCAAAGGGCGAAGAATGAATCCTCCTGTCTCAAGCATGCCTCCAACATCCCGCGCAAGAAAAGATTATGCAAGGATAGACTAGCAGGGCCCAATCCAATGGTTCATGTTTTTCATTTTTATTTTCTTTGGGGGGGGGGTCATGACAAGATTAGTCTGTGTAGATGGGAAGAAAAGGAAAGTGAAAAAAAGGAAAAAGAAAAAAAAAAAAGGCCAGTACCCTATGGTTTCGTTAGCAAACCCTTTTATATCTTTGATCAGTTATTGTGCTTGCGCTTAAAATTAATTTGTGGTTATTGTTTGCATGCCAGTGATCATTTATTGGGGGTATTGGTATTTGCCTATTTGGTAATTCAAAGGCTCTATATATGCGCTGATGTACCTTCTGGAAGGCTTGTGCTTAATGAAATCCAATGTTGGTCGCGTGCAAAAAAAATTAATATTCAGTCTTGCCTTTTATAG 2940 0.4156 MDGVARAVEQAQSSSGLASGWRPRGSVFSPCKPKGEEEASAAAGKKPQQPLHVVVRKPLVARLTKEIVETYQICNPQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNFVLIHLEKNKRYIVKDLLGHGTFGQVAKCWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILYGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNTSKFFKCIGSLQNIESSESSKNGRSVYQTLTVEEYEARELKKPSIGKEYFNQLNLEAIVTNYPYRKNLPKEDILKESQIRLALVDFLKGLVEFDPAKRWSPFQASKHPFVTGEPFTHPYKPPPETPHMPVVQNIKVDNHPGGGHWFAAGLSPNVSGKSRASLYSSPHFQMVQHPPANSYGSVGSHGSYNDSVGLGSSYGSYGESSNMFAYYSPIGPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVSSPGHYGPTSPARGTSHGSPLGKTAAVSQFNRRKNWGHSGSPQTQETFSSHWPGQYPDSTSHTEGTSQALGSSPSYLQSNSNPGNWKQRGSGGLSANQNISSLMKPSASMNPQSTEVVHDNAETGISLPDPGDWDPNYSDELLLQEDGSDESSLTTEFGRSMNLGSTETWAGFGRFNHVSSTSTPIIMQRAKNESSCLKHASNIPRKKRLCKDRLAGPNPMVHVFHFYFLWGGGHDKISLCRWEEKESEKKEKEKKKRPVPYGFVSKPFYIFDQLLCLRLKLICGYCLHASDHLLGVLVFAYLVIQRLYICADVPSGRLVLNEIQCWSRAKKINIQSCLL* 980
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0839 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Gso16g0839 979 MobiDBLite consensus disorder prediction 1 47 - -
Gso16g0839 979 ProSitePatterns Protein kinases ATP-binding region signature. 132 155 IPR017441 GO:0005524
Gso16g0839 979 PANTHER BNAC04G29850D PROTEIN 43 723 - -
Gso16g0839 979 PANTHER DUAL SPECIFICITY PROTEIN KINASE 43 723 - -
Gso16g0839 979 Gene3D Phosphorylase Kinase; domain 1 91 206 - -
Gso16g0839 979 CDD PKc_YAK1 126 469 - -
Gso16g0839 979 ProSiteProfiles Protein kinase domain profile. 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0839 979 Gene3D Transferase(Phosphotransferase) domain 1 207 470 - -
Gso16g0839 979 MobiDBLite consensus disorder prediction 581 738 - -
Gso16g0839 979 Pfam Protein kinase domain 127 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0839 979 SMART serkin_6 126 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0839 979 SUPERFAMILY Protein kinase-like (PK-like) 120 492 IPR011009 -
Gso16g0839 979 MobiDBLite consensus disorder prediction 626 738 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0839 Gso-Chr16 20277154 20326103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0839 125 355 MAP Kinase Gene Family AT3G18040 33.740 2.90e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Gso16g0839 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0839 K18670 - gmx:100792777 1662.89