Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0822 ATGAGTGGTGGCAGGAGGAGGAAGCTGCGCTTAAGCAAGATCTACTCATTTGCATGCTGCAAGGCATCTTTTGAGGGAGATCATCATTCACAGATTGGAGGAAAAGGTTATTCCAGAGTGGTGTTCTGCAACGAGCCAGATAGCTTTGTTGAGGACGGTGTTAAGAATTTTGCAGACAATTCAGTCAGATCAACAAAATATACTCTTGCCACTTTCTTTCCCAAATCTTTGTTTGAACAGTTTAGGAGAGCGGCAAACTTCTATTTTTTGGTCACTGGCACCTTGGCCTTCACAAAACTTGCTCCATACACTGCTGTCAGTGCTATCCTTCCACTGATTATTGTTATTGGGGCAACCATGGTGAAAGAAGGTATTGAAGACTTGTGCCGGAAAAAACAGGATATTGAGGTGAACAATAGAAGAGTTAAAGTGCATAAAGCTGATGGTATTTTTGAATATACTGCATGGAAGAATGTGAGGGTGGGGAATATAGTGAAGGTTGAGAAGGATGAATTCTTCCCAGCTGACCTCCTGTTACTATCATCCAGTTATGACGATGCAGTTTGCTATGTTGAGACCATGAACTTGGATGGGGAGACAAATTTAAAGTTAAAACAAGGGTTAGAGGTAACTTCTTCCTTACAGGAGGATCTCCATTTCCTAAATTTTAAAGCTACAGTGAAATGTGAAGATCCAAATGCAAATTTGTACTCATTTGTTGGGAGCATGGACTTTGAAGAGAAAAATAATGCCCTTTCTCCTCAGCAACTTCTTCTCCGCGACTCTAAACTTCGTAATACAGACTATATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTTATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATTGAAAAGAAGATGGACAGAGTCATCTATTTCTTGTTTTGCATTTTATTCCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTAAAGATGACTTTCAAAATGGGTTGATGAAAAGATGGTATTTAACACCAGATGATTCTACTGTTTTCTTTGATCCAAAAAGACCAGCTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTTTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATTGTCAAAGTCCTTCAGAGCATTTTCATCAATCAAGATATCCATATGTACTACAGGGAAGCAGACAAACCAGCTCGAGCTCGTACTTCAAACTTGAATGAGGAGCTTGGCCAAGTTGATACAATACTTTCTGATAAGACTGGAACTCTTACCTGCAACTCAATGGAGTTCATTAAATGTTCAATTGCTGGGGTAGCTTATGGCCGTGGTGCTACAGAGGTTGAGAAGGCCATGGATAGAAGAAAAGGTTCACCATCAATTCATGAGCATGATATTGAATCAGAAGCAGATAACATTAGGGGTTCGCTAGATAAAAGGGCACTCATTAAAGGTTTTAACTTTGCTGATGAAAGAATAACAAATGGAAATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTTCACCTATTGGTGGTCTGTCATACAGCCATACCAGAAGTGGATGAAGAGACAGGTAATGTCTCATATGAGGCTGAATCCCCAGATGAAGCAGCATTTGTGATTGCAGCAAGAGAACTTGGTTTTGAATTTTACAAAAGGGATCAGACTAGTTTATTGACATATGAGTTGGATCCAGTTTCTCGCAAGAAAGTTGAAAGGAAGTACAAGCTTCTCAATTGTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTCTCTGCAAAGGTGCAGACAGCATCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAGAAAACCATGGAGCATGTGCATGAGTATGCTGATGCAGGTCTACGAACCCTTATACTAGCCTATCGTGAACTTGATGCAGAAGAATACAAGGAGTTTGATAATAAATTCTCTATGGCAAAGAATTTAGTTAGTGCTGATCAGGATATACTGATTGAGGAAGTATCGGAAAAGATTGAGAAGAACCTAATTCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGAATGCATTGACAAGCTTGCCCGAGCAGGAATTAAAATTTGGGTTTTGACAGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCTTGTAGTTTGCTTAGACAAGGAATGAAGCAGATTATAATTCATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAGGATGGAGACAAGATGGCTATTGCAAAGGCATCAAGGCAAAGTGTACTCCTTCAGATATCTGATGGTGCTGCACAACTCACTGCATACAGAGGGAGCTCTCATCAGGCCTTTGCTCTGATTATTGATGGAAAATCACTTGCTTATGCATTAGAAGATAATATGAAGAACATGTTTCTGGAGCTTGCGATTCGCTGTGCATCTGTTATTTGCTGTCGCTCATCACCAAAGCAGAAGGCAATGGTCACTAGATTGGTCAAATCTGGAGCCAGGAAAACAACATTAGCTATTGGTGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGGGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGGTTACTTCTGGTGCATGGACATTGGTGTTACCGGAGGATCTCATCTATGATATGCTATTTTTTCTACAAGAATATCACATTTGGTTTTACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGACAAGCTGCATACAACGACTGGTTTTTGTCTCTCTATAATGTTTTCTTTTCGTCACTTCCTGTGATTGCACTTGGGGTATTTGATCAGGATGTATCCGCTCGGTACTGCCTGAAGTTTCCTTTGTTATATCAAGAAGGAGTACAGAATGTTCTTTTCAGTTGGCGTCGAATACTCAGCTGGATGCTTAATGGATTTATCAGTGCCTTAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAGGCCTTTGATGTGGAGGGGAGAACTGCTGGAAAGGATATACTGGGAGCAGCAATGTATACTTGTGTAGTTTGGGTTGTAAACCTGCAAATGGCACTAGCTGTAAGTTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTCTTTTGTGGTATCTTTTTCTCGTGGTATATGGAGCAATGCCCCCACACTTTTCCACAAATGCTTACAAAGTCTTCATTGAAGCTCTTGCTCCATCCCCTTCCTATTGGATTGTGACACTCTTTGTGGTGATCTCCACCCTTATACCATACTTCTCACACGCAGCAATTCGGATGCGGTTCTTTCCCATGTATCATGAAACAGTGCAATGGATAAGGTATGAAGGGAAGATTAAGGATCCTGAGTTTTTGTCGGTTCAACAGCACGCATAG 3522 0.4037 MSGGRRRKLRLSKIYSFACCKASFEGDHHSQIGGKGYSRVVFCNEPDSFVEDGVKNFADNSVRSTKYTLATFFPKSLFEQFRRAANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDLCRKKQDIEVNNRRVKVHKADGIFEYTAWKNVRVGNIVKVEKDEFFPADLLLLSSSYDDAVCYVETMNLDGETNLKLKQGLEVTSSLQEDLHFLNFKATVKCEDPNANLYSFVGSMDFEEKNNALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDRVIYFLFCILFLMAFVGSIFFGIATKDDFQNGLMKRWYLTPDDSTVFFDPKRPAAAALFHCLTALMLYGFFIPISLYVSIEIVKVLQSIFINQDIHMYYREADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGRGATEVEKAMDRRKGSPSIHEHDIESEADNIRGSLDKRALIKGFNFADERITNGNWVNEPHADVIQKFFHLLVVCHTAIPEVDEETGNVSYEAESPDEAAFVIAARELGFEFYKRDQTSLLTYELDPVSRKKVERKYKLLNCLEFNSSRKRMSVIVEDEEGKILLLCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELDAEEYKEFDNKFSMAKNLVSADQDILIEEVSEKIEKNLILLGATAVEDKLQDGVPECIDKLARAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIIHLDSPEIQALEKDGDKMAIAKASRQSVLLQISDGAAQLTAYRGSSHQAFALIIDGKSLAYALEDNMKNMFLELAIRCASVICCRSSPKQKAMVTRLVKSGARKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQAAYNDWFLSLYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNVLFSWRRILSWMLNGFISALIIFFFCTKAMELQAFDVEGRTAGKDILGAAMYTCVVWVVNLQMALAVSYFTMIQHFFIWGSILLWYLFLVVYGAMPPHFSTNAYKVFIEALAPSPSYWIVTLFVVISTLIPYFSHAAIRMRFFPMYHETVQWIRYEGKIKDPEFLSVQQHA* 1174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0822 1173 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1169 - -
Gso16g0822 1173 Gene3D - 703 908 IPR023214 -
Gso16g0822 1173 Gene3D - 125 288 - -
Gso16g0822 1173 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 705 IPR023299 GO:0000166
Gso16g0822 1173 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 839 951 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Gso16g0822 1173 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 57 1153 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Gso16g0822 1173 SUPERFAMILY Calcium ATPase, transmembrane domain M 54 1146 IPR023298 -
Gso16g0822 1173 SFLD p-type atpase 410 919 IPR044492 -
Gso16g0822 1173 SUPERFAMILY Calcium ATPase, transduction domain A 142 285 IPR008250 -
Gso16g0822 1173 CDD P-type_ATPase_APLT_Dnf-like 59 1028 - -
Gso16g0822 1173 PRINTS P-type cation-transporting ATPase superfamily signature 426 440 - -
Gso16g0822 1173 PRINTS P-type cation-transporting ATPase superfamily signature 868 887 - -
Gso16g0822 1173 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1169 - -
Gso16g0822 1173 Pfam Cation transport ATPase (P-type) 535 629 - -
Gso16g0822 1173 SUPERFAMILY HAD-like 421 923 IPR036412 -
Gso16g0822 1173 Pfam Phospholipid-translocating P-type ATPase C-terminal 896 1146 IPR032630 -
Gso16g0822 1173 Gene3D - 546 702 IPR023299 GO:0000166
Gso16g0822 1173 Pfam Phospholipid-translocating ATPase N-terminal 54 108 IPR032631 -
Gso16g0822 1173 ProSitePatterns E1-E2 ATPases phosphorylation site. 428 434 IPR018303 -
Gso16g0822 1173 SFLD Haloacid Dehalogenase 410 919 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0822 Gso-Chr16 19151596 19159582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0822 1 1169 Primary Pumps ATPases AT1G68710 72.546 0.0 1823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0822 K01530 - gmx:100792960 2317.35