Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0794 ATGGATAACAACCCAAAAACAACAGCTAATTGTGAGAAATGGTGCAGGCACGAGGTAGCTGGTGTAGTGACAGAGGTGGGAAGCAAAGTAGAAAAGTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGCTTGGTTGATTCCTGTTGCACCTACCAGAACTATGATGACAATCTTGAGAATTATTGTCCTCAATATACGCTCACATATGGTGCCAAATATAGAGATGGCACCATCACATACGGAGGCTACTCTAACTCAATGGTTGCAGATGAGCATTTTGTGATTCGCATTCCTGATAGCTTAGCACTTGATGCTACTGCACCTCTTATTTGTGTTGGCATCACTGTGTATAGCCCTCTCAGATATTATGGACTTGACAAGCCTGACCTACATGTTGGTGTGGTTGGTCTCGGTGGACTAGGTCACATGGCTGTCAAGTTTGCCAAAGCTTTTGGAGCTAAGGTCATAGTAATAAGTACATCACCTAGTAAAAAGGATGAAGCAATACAACATCTTGGAGCTGATTCCTTTCTACTAAACCGTGACCAAGATCAGATGCAGGGTACAATGGGTGCTTTGGATGGTATTATTGACACAGTTTCTGCGGTTCATCCTCTCTTACCTCTCATTGGTTTGCTCAAGTCTCATGGAAAGATTGTAATGGTGGATGCACCAGAGAGGCCTCTAGAACTACCAGTCTTTCCTTTACTTGCTGCGAAACACAATGTCAAACCTGACATTGAAGTCATTCCTATGGACTATGTCAACACAGCAATGGAACGACTCCTTAAAGAAGATGTTAAATATCGATTTGTTATTGACATTGGAAACACACTGAAAGTCTGA 846 0.4255 MDNNPKTTANCEKWCRHEVAGVVTEVGSKVEKFKVGDKVGVGCLVDSCCTYQNYDDNLENYCPQYTLTYGAKYRDGTITYGGYSNSMVADEHFVIRIPDSLALDATAPLICVGITVYSPLRYYGLDKPDLHVGVVGLGGLGHMAVKFAKAFGAKVIVISTSPSKKDEAIQHLGADSFLLNRDQDQMQGTMGALDGIIDTVSAVHPLLPLIGLLKSHGKIVMVDAPERPLELPVFPLLAAKHNVKPDIEVIPMDYVNTAMERLLKEDVKYRFVIDIGNTLKV* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0794 281 SUPERFAMILY GroES-like 17 144 IPR011032 -
Gso16g0794 281 PANTHER ALDEHYDE REDUCTASE 237 280 - -
Gso16g0794 281 PANTHER ALDEHYDE REDUCTASE 14 237 - -
Gso16g0794 281 Pfam Zinc-binding dehydrogenase 139 243 IPR013149 -
Gso16g0794 281 Pfam Alcohol dehydrogenase GroES-like domain 15 96 IPR013154 -
Gso16g0794 281 CDD CAD1 17 274 - -
Gso16g0794 281 Gene3D - 17 272 - -
Gso16g0794 281 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 237 280 - -
Gso16g0794 281 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 14 237 - -
Gso16g0794 281 Gene3D - 112 245 - -
Gso16g0794 281 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 103 243 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0794 Gso-Chr16 18130708 18132414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0794 17 280 Monolignol Biosynthesis Gene Families AT4G37990 62.718 6.77e-109 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0794 - K23232 gsj:114389815 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1660 9 40943474 40945883 Gso16g0794 16 18130708 18132414 PCT
Gso16g0794 16 18130708 18132414 Gso9g1660 9 40943474 40945883 PCT