Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0759 ATGGTCACTATCTTGGTGCGTAGCACTACAATTGAACACCAACTGCAACGCGAATTTTGGTGGCAAACATGGAATCAAACTCCTCAAACCCAAAGTTGTTGTATTAGCATTCACAAAGAGAGCACCATCATCCAAAGAACGTCAAGATTCTCCACATTCAAAACCATTAGATTCATGGGTTTTCTAACTCTCACTAATTACTTGATTTTTTTGCTCATATTTTCCAGCTTCTATATGGGTGTAATCTCTGTGAATGATACCATCACATCAACCAGATTCATCAGGGACCCTGAGACTATAATCTCAAGCAACGGTGACTTCAAGCTAGGATTCTTCAGCCCTGAAAAATCCACACATCGCTATGTAGCTATCTGGTATCTCGCTGAAACCTACATCATATGGATAGCCAATAGAGACCAACCACTTAGTGATTTATCTGGGCCTGGGGTGTTCAAAATTCACAAGGATGGGAATCTTGTGGTATTGAATGCACAAAATAGGGTCATATGGTCAACAAATGTGTCAATTACTGCTACCAATACAACTGCTCAACTTGATGATTCGGGAAATCTGATCCTGCGTGATGTCACAAATGGAAAAACATTATGGGACAGTTTCACACACCCTGCTGATGCTGCAGTGCCATCGATGAAGATTGCTGCCAACAGGCTCACAGGTAAGAAAATCGAGTATGTGTCATGGAAAAGCAGTTCAGATCCTTCTTCTGGGTACTTCACAGGGAGCCTTGAACGGTTGGATGCTCCAGAAGTCTATTTTTGGTACAACAAAACAAAGCCATATTGGAGAACTGGTCCATGGAATGGAAGGGTCTTCCTTGGGTCACCAAGGATGTCAACTGAGTACCTATATGGCTGGCGTTTTGAGCCTAATGATAGTGGAACAGCTTATCTAACCTACAACTTTGAAAACCCTTCTATGTTTGGAGTCCTGACCATAAGTCCACATGGAACACTTAAATTGGTAGAGTTTTTGAACAAAAAGATATTTCTGGAGCTTGAGGTGGATCAAAATAAGTGTGACCTTTATGGGACATGTGGGCCTTTTGGAAGCTGTGATAACTCAACATTACCAATTTGCAGCTGTTTTGAGGGGTTTGAGCCCAGAAATCCAGAGGAATGGAACAGGGAAAATTGGACTAGTGGATGTGTGAGGAATGTGCAACTGAATTGTGGCAAGTTGAATAATACGAGTGATGTTCAACAAGATCGGTTTCGGGTGTACCAAAATATGAAAGTGCCTGACTTTGCAAAGAGATTATTAGGTAGTGACCAAGACAGATGCGGAACAAGTTGCTTAGGAAATTGCTCTTGCTTGGCATATGCATATGATCCTTACATTGGTTGCATGTATTGGAATAGTGACTTGATTGATTTGCAGAAATTTCCAAATGGAGGGGTTGATCTCTTCATTCGTGTGCCAGCAAATCTTCTAGTTGCAGCGGGTGGTAAAAAGAGAAGAGAAAACATGGGATTACTCATTGGCATTACTGGGGCAATTGGAGCATTAATCATAGCTGTCGGTGCTTATCTTTTGTGGCGGAAGTTTACTCCTAAGCATACAGGAAATCAGCCTCAAAACATGATTACCGGAGACCAAAAACAAATTAAACTGGAAGAGCTGCCACTGTTTGAATTCGAAAAGCTATCAACTGCTACAAACAACTTTCACTTGGCCAATATGCTTGGCAAGGGAGGTTTTGGTCCGGTATACAAGGGGCAATTGGATAACGGACAAGAAATTGCCGTGAAAAGACTTTCAAAAGCATCTGGACAAGGATTGGAAGAATTTATGAATGAAGTTGTTGTGATTTCTAAACTTCAACATCGCAATCTAGTGAGACTTCTTGGTTGTTGTATAGAACGAGATGAACAAATGTTGGTATATGAGTTTATGCCAAATAAAAGTTTGGATTCATTTCTATTTGATCCACTCCAAAGGAAAATACTAGATTGGAAAAAACGCTTCAACATAATTGAAGGAATAGCTAGAGGAATACTTTATCTTCATAGAGACTCAAGACTAAGGATTATACACAGAGATCTTAAAGCAAGCAACATCTTACTAGATGATGAGATGCATCCCAAAATATCAGACTTTGGTTTAGCTAGAATTGTTAGAAGTGGTGATGATGATGAAGCTAACACGAAAAGGGTTGTTGGAACTTATGGTTATATGCCGCCTGAATATGCAATGGAGGGAATTTTCTCAGAAAAATCAGATGTCTATAGCTTTGGAGTGTTGTTGCTAGAGATTGTAAGCGGACGAAGAAACACTAGCTTTTATAACAATGAGCAATCACTTAGCCTTGTTGGATATGCATGGAAACTATGGAATGAAGGCAACATCAAGTCTATAATAGATCTAGAGATACAGGATCCAATGTTCGAAAAGAGTATATTGAGGTGCATACATATAGGACTTCTATGTGTGCAAGAACTTACAAAAGAAAGACCAACTATCTCCACTGTGGTTTTGATGCTCATAAGTGAGATTACACATCTTCCTCCTCCAAGGCAAGTTGCATTTGTTCAGAAACAAAATTGTCAAAGTTCAGAGTCTTCTCAAAAAAGTCAATTTAATTCAAACAACAATGTAACTATAAGTGAAATTCAAGGTAGATAA 2643 0.3954 MVTILVRSTTIEHQLQREFWWQTWNQTPQTQSCCISIHKESTIIQRTSRFSTFKTIRFMGFLTLTNYLIFLLIFSSFYMGVISVNDTITSTRFIRDPETIISSNGDFKLGFFSPEKSTHRYVAIWYLAETYIIWIANRDQPLSDLSGPGVFKIHKDGNLVVLNAQNRVIWSTNVSITATNTTAQLDDSGNLILRDVTNGKTLWDSFTHPADAAVPSMKIAANRLTGKKIEYVSWKSSSDPSSGYFTGSLERLDAPEVYFWYNKTKPYWRTGPWNGRVFLGSPRMSTEYLYGWRFEPNDSGTAYLTYNFENPSMFGVLTISPHGTLKLVEFLNKKIFLELEVDQNKCDLYGTCGPFGSCDNSTLPICSCFEGFEPRNPEEWNRENWTSGCVRNVQLNCGKLNNTSDVQQDRFRVYQNMKVPDFAKRLLGSDQDRCGTSCLGNCSCLAYAYDPYIGCMYWNSDLIDLQKFPNGGVDLFIRVPANLLVAAGGKKRRENMGLLIGITGAIGALIIAVGAYLLWRKFTPKHTGNQPQNMITGDQKQIKLEELPLFEFEKLSTATNNFHLANMLGKGGFGPVYKGQLDNGQEIAVKRLSKASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIERDEQMLVYEFMPNKSLDSFLFDPLQRKILDWKKRFNIIEGIARGILYLHRDSRLRIIHRDLKASNILLDDEMHPKISDFGLARIVRSGDDDEANTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVSGRRNTSFYNNEQSLSLVGYAWKLWNEGNIKSIIDLEIQDPMFEKSILRCIHIGLLCVQELTKERPTISTVVLMLISEITHLPPPRQVAFVQKQNCQSSESSQKSQFNSNNNVTISEIQGR* 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0759 880 Gene3D Phosphorylase Kinase; domain 1 536 637 - -
Gso16g0759 880 PIRSF SRK 57 880 IPR024171 GO:0004674
Gso16g0759 880 Pfam PAN-like domain 407 465 IPR003609 -
Gso16g0759 880 Gene3D - 80 208 IPR036426 -
Gso16g0759 880 SMART serkin_6 562 836 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0759 880 SUPERFAMILY Protein kinase-like (PK-like) 547 854 IPR011009 -
Gso16g0759 880 ProSiteProfiles Bulb-type lectin domain profile. 85 206 IPR001480 -
Gso16g0759 880 CDD STKc_IRAK 568 834 - -
Gso16g0759 880 Gene3D Transferase(Phosphotransferase) domain 1 638 842 - -
Gso16g0759 880 MobiDBLite consensus disorder prediction 858 880 - -
Gso16g0759 880 ProSiteProfiles EGF-like domain profile. 342 378 IPR000742 -
Gso16g0759 880 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 74 879 - -
Gso16g0759 880 Pfam Protein tyrosine and serine/threonine kinase 563 830 IPR001245 GO:0004672|GO:0006468
Gso16g0759 880 CDD PAN_AP_plant 393 480 - -
Gso16g0759 880 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 74 879 - -
Gso16g0759 880 ProSiteProfiles Protein kinase domain profile. 562 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0759 880 SUPERFAMILY alpha-D-mannose-specific plant lectins 124 240 IPR036426 -
Gso16g0759 880 SMART ntp_6 406 479 IPR003609 -
Gso16g0759 880 Pfam D-mannose binding lectin 132 235 IPR001480 -
Gso16g0759 880 CDD B_lectin 91 209 IPR001480 -
Gso16g0759 880 Pfam S-locus glycoprotein domain 268 375 IPR000858 GO:0048544
Gso16g0759 880 SMART blect_4 91 209 IPR001480 -
Gso16g0759 880 ProSiteProfiles PAN/Apple domain profile. 397 480 IPR003609 -
Gso16g0759 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 683 695 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0759 Gso-Chr16 15090671 15098082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0759 550 880 Receptor kinase-like Gene Family AT4G11530 55.917 2.00e-122 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso16g0759 PK_Tyr_Ser-Thr 5.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0759 - - gmx:100811896 1738.01