Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0756 ATGGCGACCCCCCCAAACGACGCCGCATCGACAAAGAAGCCCCAGCCCATACCATGGACCCACCAGGAGACCGTGCACCTCATCCGCGCCTACCAGGAGAAGTGGTATGCCCTTAAGCGGGGCCCACTCCGCCACAACCAGTGGGAGGAGGTCGCCGTCGTTGTCGCCGCCCGCTGCGGCTATGACCTCGCCCACCCCGCTAAGTCCGCCCTCCAGTGCCGCCACAAGATGGAAAAGCTCCGCCAGCGCCACCGTGCCGAGAAGAAGCAACAACACACCGCGGCCGCCCTCCGCCCTGGCGCGTGGCAGTACAACTCCCTCATGGACGACCTCGAGCGCGGCCCCCTCCCCATCTCCGCCCTCGCCCCTCTCGACACCTTTGAAGAAGAAGACGAAAACAACGACGACACCATTGACGATCGAAACGACTATGATGGCGACGGGAGTTTTATTAACATCAAGTCGAAGAGTATTAACTGTATCCTCAGCGAGAGGCCTGTGAGAATGAGAAGCAACAAAAGAGGGTTTTTGAGAGAGCACGTTGTTGTTAAAGAAGAAGAGGAGAATGAAAACGAAGACGACGACGTTTTGGGGTTGTCGACGGAGATGAGGGCTTTCGCGGAGAGGTTTATTGGGATGGAGAGTTTGAAGATGGAGATGATGAAGGAGACGGAGAGGTGTAGGTTGGAGATGGAGAAGAAGCGGATCCAGATGATTCTGGAAACGCAAAGGAGGATCGTTGATTCCATTGGGAGGGCGTTTGGGTCTAACAAGAGGATCAAGATTACTCAACAAAACTGA 801 0.5593 MATPPNDAASTKKPQPIPWTHQETVHLIRAYQEKWYALKRGPLRHNQWEEVAVVVAARCGYDLAHPAKSALQCRHKMEKLRQRHRAEKKQQHTAAALRPGAWQYNSLMDDLERGPLPISALAPLDTFEEEDENNDDTIDDRNDYDGDGSFINIKSKSINCILSERPVRMRSNKRGFLREHVVVKEEEENENEDDDVLGLSTEMRAFAERFIGMESLKMEMMKETERCRLEMEKKRIQMILETQRRIVDSIGRAFGSNKRIKITQQN* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0756 266 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 10 262 IPR044823 -
Gso16g0756 266 Pfam Myb/SANT-like DNA-binding domain 18 110 IPR044822 -
Gso16g0756 266 Gene3D - 19 86 - -
Gso16g0756 266 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 10 262 - -
Gso16g0756 266 ProSiteProfiles Myb-like domain profile. 18 81 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0756 Gso-Chr16 14936217 14938640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0756 19 88 Trihelix Transcription Factor Family AT3G14180 31.429 1.19e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso16g0756 Myb_DNA-bind_4 1.9e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0756 - - gmx:100810821 486.108