Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0723 ATGGATTTCCTTCCACAACCAACACTTGTAGTGATAGTTATAACTATTGTGCTTCTCTACAACATATGGAGGAAAAAAAGCAGTACTATTCACAAAATCAAGGGTCTACAACCCCCTGAACCCTCATTTGCCTTACCTTTGATTGGTCACCTCCACTTGCTAGGAGCAAAAACACCCCTTGCTAGAATCTTTGCTTCTCTGGCTGATAAGTATGGCCCCATCTTCCAAATCCATTTAGGAGCATACCCTGCGCTTGTGATTTGCAACCAAGAGGCTATAAAAGAGTGCTTCACTACTAATGACAAAGTCTTGGCCTCACGCCCAAAGTCAAGTCATGGTGTGCACCTTAGTTACAATTTTGCAGGGTTTGGATTTGCCCCTTATGGCTCATATTGGATAAAGCTTAGAAAGCTTACCATGCTTGAATTGCTCTCGGCTCGCCGCCTCGAATTTCTTAGGCCTGTTTATGAATCTGAAATTGATACTTTGATCCGGGATCTTTGGATGTATCTTGGAGGCAAAAGTGATGTTAAGGTCACAATAAGTGAATGGTTGGAACGCTTAACCTTCAATATGATCACAAAGATGATTGCAGGGAAAAGGTATTTCAGTTATTTGCAAGATGTGGATGATGTAGAGGCACATGGTATAGTGAAACTCATAAAGGAGTTCATGCATATATCTGGGGAATTTGTTCTCTCGGATTTGATTCCACTTCTTGGATGGTTAGGTGTGCATGGAACAGTGCTTAAAAATATGAAACGAATTGCAAAAGATTTGGACACCCTTGTGGGAGGTTGGGTCGAAGAGCATATGAAGAGTGATACCCTGACCAACAAGTCATGGGAGAAACATGATTTCATTGATGTCATGCTTTCTGTTATTGAGGATGATTCTGTCTCTGGTCATACCCGTGATACTATCATTAAAGCAAACGTTATGAATCTTATGCTAGCGGGGTCAGACACAACATCCACGACAATGACATGGACACTAGCCATGTTGATGAAGAACCCGCACGCTTTGAAGCGTGCACAAGAGGAGATTGACCATCAAGTGGGTAGGGAAAGAAGAAGGGTGGAAGCACGTGACATCAAAGACCTAATTTACTTGCAAGCAATTGTCAAAGAAACTTTAAGACTATATCCTCCGGGGCCAGTATTGGTACCCCACGAGGCAAGAGAAGATTGCAACATTCAAGGCTATCACGTGCCAAAAGGCACACGTGTGTTTGCAAACGTGTGGAAACTCCACAGAGACCCTAGCCTTTGGTCAGAGCCCGAGAAGTTTTCACCCGAGAGGTTTATTAGTGAGAATGGAGAACTTGATGAGGTTCACCATTTTGAGTACTTGCCTTTTGGGTCAGGGAGAAGGGCTTGCCCTGGATCCACTTTTGCCACACAAGTGTGTCTCTTGACACTTTCTCGGTTGCTCCAAGGGTTTGACTTGCACGTGCCAATGGATGAACCTGTTGATTTGGAAGAAGGGTTGGGCATCACCTTGCCTAAGATGAATCCATTGCAAATTGTTCTGAGTCCGCGGTTACCCAGTGAGTTTTATCAATGA 1566 0.4368 MDFLPQPTLVVIVITIVLLYNIWRKKSSTIHKIKGLQPPEPSFALPLIGHLHLLGAKTPLARIFASLADKYGPIFQIHLGAYPALVICNQEAIKECFTTNDKVLASRPKSSHGVHLSYNFAGFGFAPYGSYWIKLRKLTMLELLSARRLEFLRPVYESEIDTLIRDLWMYLGGKSDVKVTISEWLERLTFNMITKMIAGKRYFSYLQDVDDVEAHGIVKLIKEFMHISGEFVLSDLIPLLGWLGVHGTVLKNMKRIAKDLDTLVGGWVEEHMKSDTLTNKSWEKHDFIDVMLSVIEDDSVSGHTRDTIIKANVMNLMLAGSDTTSTTMTWTLAMLMKNPHALKRAQEEIDHQVGRERRRVEARDIKDLIYLQAIVKETLRLYPPGPVLVPHEAREDCNIQGYHVPKGTRVFANVWKLHRDPSLWSEPEKFSPERFISENGELDEVHHFEYLPFGSGRRACPGSTFATQVCLLTLSRLLQGFDLHVPMDEPVDLEEGLGITLPKMNPLQIVLSPRLPSEFYQ* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0723 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Gso16g0723 521 Gene3D Cytochrome P450 31 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 520 - -
Gso16g0723 521 SUPERFAMILY Cytochrome P450 38 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 Pfam Cytochrome P450 38 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0723 521 PANTHER CYTOCHROME P450 82C3-RELATED 13 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0723 Gso-Chr16 12170871 12174579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0723 39 520 Cytochrome P450 AT4G31940 46.856 1.98e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0723 - - gmx:100790675 1043.49