Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0708 ATGAGTTTCCGTCATTCCATCATGAACGCTCTTCCCATTCTCCTCTTCTTCCTCTTCGTTTCTGCATTAGTTTCTGCGAAGAAAACTGGTGATGTGACGGAGCTGCAAATTGGCGTGAAGCATAAACCAGTATCATGTGAAGTTCAGGCACACAAAGGTGACAGAGTCAAAGTACACTATCGGGGAAAACTCACTGATGGAACTGTTTTCGATTCTAGCTTTGAAAGAAATAATCCAATTGAATTTGAGCTTGGTACTGGTCAAGTGATCAAAGGTTGGGACCAGGGATTATTGGGAATGTGTCTTGGTGAGAAGCGGAAGCTGAAAATACCATCAAAACTTGGCTATGGAGAGCAGGGTTCCCCACCCACTATTCCAGGTGGTGCTACACTCATATTTGACGCTGAGCTTGTGGGAGTGAACGACAAAAGTTTAGGCGAAGGAAAAGGAAACAACGAACTGTAG 465 0.443 MSFRHSIMNALPILLFFLFVSALVSAKKTGDVTELQIGVKHKPVSCEVQAHKGDRVKVHYRGKLTDGTVFDSSFERNNPIEFELGTGQVIKGWDQGLLGMCLGEKRKLKIPSKLGYGEQGSPPTIPGGATLIFDAELVGVNDKSLGEGKGNNEL* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0708 154 Gene3D - 21 141 IPR046357 GO:0003755
Gso16g0708 154 PANTHER - 13 146 IPR044609 GO:0000413|GO:0003755|GO:0061077
Gso16g0708 154 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP15-2 13 146 - -
Gso16g0708 154 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 138 IPR001179 GO:0003755
Gso16g0708 154 SUPERFAMILY FKBP-like 11 143 - -
Gso16g0708 154 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 53 141 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0708 Gso-Chr16 11118201 11121774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0708 54 139 Calmodulin-binding Proteins AT3G25230 32.967 6.67e-06 43.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0708 16 11118201 11121774 Gso3g0760 3 27235573 27239666 GST
Gso18g1297 18 34752976 34757917 Gso16g0708 16 11118201 11121774 PCT
Gso16g0706 16 11101819 11107167 Gso16g0708 16 11118201 11121774 PCT
Gso16g0708 16 11118201 11121774 Gso18g1297 18 34752976 34757917 PCT
Gso16g0708 16 11118201 11121774 Gso16g0706 16 11101819 11107167 PCT