Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0706 ATGGACGAGGATTTCGACATGGCGGCGGCGGAGCCCATGGGCGAGGACTTCGACTTCGCCGGCAGCGGCAGCAACCCCGTCCTGAAGGTCGGCGAGGAGAAGGAGATTGGGAAAGAGGGTTTGAAGAAGAAGCTCCTGAAAGAAGGTGAAGGATGGGACACCCCTGAAGCTGGTGACGAAGTTCAAGTTCACTATACTGGGACGTTGCTTGATGGCACGAAGTTTGACTCTAGCAGAGATAGGGGAACTCCTTTCAGTTTCACGCTTGGACAAGGGCAAGTTATTAAAGGATGGGATCAAGGTATTATAACAATGAAGAAAGGTGAAAATGCCCTTTTCACCATCCCAGCTGAGCTAGCTTATGGTGAATCTGGTTCTCCTCCAACAATCCCCCCCAATGCAACTCTTCAATTTGATGTGGAGCTGTTGTCTTGGACTAGTGTGAAGGACATATGTAAGGATGGAGGCTTATTTAAGAAGATACTTACCGAGGGAGAGAAATGGGAAAACCCCAAGGATCCTGATGAAGTTTTAGTGAAGTATGAAGCACATCTTGAGGATGGAACTCTTGTGGCTAAATCTGATGGAGTGGAGTTCACAGTCAACGATGGTCATTTTTGTCCTGCTTTTTCAAAGGCTGTTAAAACCATGAAGAAGGGAGAGAAAGTGCTTTTGACAGTGAAGCCACAATATGGATTTGGTGAGAAGGGTAAGCCAGCGCATGGTGATGAAGGTGCAGTTCCACCAAATGCAACTTTGCAGATTACTCTCGAGCTAGTTTCTTGGAAGACTGTGTCTGAAGTAACTGATGACAAGAAGGTCATTAAGAAGATCCTCAAGGAAGGGGAAGGATATGAGCATCCAAATGAGGGAGCCATTGTGAAATTGAAAGTAATTGGTAAACTGCAAGATGGTACTTTATTTTTGAAAAAGGGTCATGATGATGAAGGAGGGCTGTTTGAATTCAAAACTGATGAGGAGCAAGTAATTGATGGGCTTGACAGAGCTGTGTTGACTATGAAGAAGGGTGAGGTAGCATTGTTGACTATAGCACCTGAATATGCTTTTGGTTCATCAGAGTCTCAACAGGAACTTGCAGTAGTTCCACCTAACTCCACATTATATTACGAGATTGAGCTAGTATCATTTGAGAAGGAGAAGGAGTCCTGGGACATGGACACACCAGAGAAGATTGAAGCTGCTGGTAAGAAGAAAGAAGAAGGAAATGCATTATTTAAAGCTGGTAAATATGCAAGAGCTTCTAAAAGATATGAGAAGGCTGTAAAGTTCATAGAGTACGATACTGCCTTTAGCGAAGAGGAGAAGAAGAGCTCCAAATTCTTGAAGGTTGCCTGTAATTTAAACAATGCAGCATGCAAGTTAAAATTAAAAGATTACAAACAAGCAGAGAAATTGTGCACAAAGGTACTGGACCTTGAGAGTACTAACGTGAAGGCTCTTTATAGACGGACCCAGGCATATATCCAGTTGGCTGATTTAGATTTGGCTGAATTTGATATTAAGAAAGCTCTTGAGCTTGAACCTAACAACAGGGATGTCAAGCTTGAGTACGTGACTCTGAAGGAAAAGATGAAGGAGTACAACAAGAAAGAGGCAAAATTTTATGGAAATATGTTCAACAAACTGCACAAGCTAGATTCTCTTGACAATAGTAAACCAGCGTCGAAGGATGCTCAGCCCATAAATATAGACAGCAAATCATAA 1725 0.4296 MDEDFDMAAAEPMGEDFDFAGSGSNPVLKVGEEKEIGKEGLKKKLLKEGEGWDTPEAGDEVQVHYTGTLLDGTKFDSSRDRGTPFSFTLGQGQVIKGWDQGIITMKKGENALFTIPAELAYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGLFKKILTEGEKWENPKDPDEVLVKYEAHLEDGTLVAKSDGVEFTVNDGHFCPAFSKAVKTMKKGEKVLLTVKPQYGFGEKGKPAHGDEGAVPPNATLQITLELVSWKTVSEVTDDKKVIKKILKEGEGYEHPNEGAIVKLKVIGKLQDGTLFLKKGHDDEGGLFEFKTDEEQVIDGLDRAVLTMKKGEVALLTIAPEYAFGSSESQQELAVVPPNSTLYYEIELVSFEKEKESWDMDTPEKIEAAGKKKEEGNALFKAGKYARASKRYEKAVKFIEYDTAFSEEEKKSSKFLKVACNLNNAACKLKLKDYKQAEKLCTKVLDLESTNVKALYRRTQAYIQLADLDLAEFDIKKALELEPNNRDVKLEYVTLKEKMKEYNKKEAKFYGNMFNKLHKLDSLDNSKPASKDAQPINIDSKS* 575
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0706 574 Gene3D - 150 263 IPR046357 GO:0003755
Gso16g0706 574 MobiDBLite consensus disorder prediction 1 25 - -
Gso16g0706 574 Gene3D Tetratricopeptide repeat domain 387 544 IPR011990 GO:0005515
Gso16g0706 574 Pfam Tetratricopeptide repeat 485 517 IPR019734 GO:0005515
Gso16g0706 574 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 174 263 IPR001179 GO:0003755
Gso16g0706 574 SUPERFAMILY FKBP-like 34 151 - -
Gso16g0706 574 MobiDBLite consensus disorder prediction 554 574 - -
Gso16g0706 574 SMART tpr_5 450 483 IPR019734 GO:0005515
Gso16g0706 574 SMART tpr_5 484 517 IPR019734 GO:0005515
Gso16g0706 574 SMART tpr_5 401 434 IPR019734 GO:0005515
Gso16g0706 574 Coils Coil 517 537 - -
Gso16g0706 574 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 272 383 - -
Gso16g0706 574 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 270 - -
Gso16g0706 574 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 384 554 - -
Gso16g0706 574 SUPERFAMILY TPR-like 390 549 IPR011990 GO:0005515
Gso16g0706 574 MobiDBLite consensus disorder prediction 559 574 - -
Gso16g0706 574 Gene3D - 31 149 IPR046357 GO:0003755
Gso16g0706 574 Gene3D - 264 385 IPR046357 GO:0003755
Gso16g0706 574 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Gso16g0706 574 SUPERFAMILY FKBP-like 150 266 - -
Gso16g0706 574 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 58 146 IPR001179 GO:0003755
Gso16g0706 574 SUPERFAMILY FKBP-like 268 401 - -
Gso16g0706 574 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 54 143 IPR001179 GO:0003755
Gso16g0706 574 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 169 260 IPR001179 GO:0003755
Gso16g0706 574 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 285 381 IPR001179 GO:0003755
Gso16g0706 574 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 384 IPR001179 GO:0003755
Gso16g0706 574 PANTHER PEPTIDYLPROLYL ISOMERASE 1 270 - -
Gso16g0706 574 PANTHER PEPTIDYLPROLYL ISOMERASE 272 383 - -
Gso16g0706 574 PANTHER PEPTIDYLPROLYL ISOMERASE 384 554 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso16g0706 Gso-Chr16 11101819 11107167 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0706 1 550 Calmodulin-binding Proteins AT3G25230 80.364 0.0 885
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0706 K09571 - gmx:100803189 1094.34
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1297 18 34752976 34757917 Gso16g0706 16 11101819 11107167 GST
Gso16g0706 16 11101819 11107167 Gso3g0761 3 27258659 27264160 GST
Gso16g0706 16 11101819 11107167 Gso16g0708 16 11118201 11121774 PCT
Gso16g0706 16 11101819 11107167 Gso3g0760 3 27235573 27239666 PCT
Gso16g0708 16 11118201 11121774 Gso16g0706 16 11101819 11107167 PCT
Gso3g0760 3 27235573 27239666 Gso16g0706 16 11101819 11107167 PCT