Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0695 ATGAATTATCCAAAGGGAGAGGAACTAAACGAAGGATTATTACGAACCATAGAAGGATGTCGGATATGTGTAGTTGTTTTCTCCACAAACTACCCTGCGTCTTCTTGGTGTCTTAAAGAGTTGGAAAAAATCATTGAATGCCACAAAACTTATGGCCACATAGTTTTGCCCATATTTTACGATGTTGATCCCTCCCATATACGTCATCAGCGGGGTGCTTTTGGGAAAAATTTGAAAGCATTTCAAGGATTGTGGGGAAAATCTGTGTTGTCGAGGTGGCGCACGGTACTCACCGAAGCTGCAAACTTCTCGGGTTGGGATGTGAGCAATAACAGGAACGAGGCTCAATTAGTGAAGGAAATTGCTGAAGATGTTCTCACAAAACTAGACAACACATTCATGCATATGACTGAATTTCCTGTTGGATTAGAATCCCATGTGCAAGAAGTGATTGGATATATTGAAAATCAGTCAACCAAAGTTTGTATCGTAGGGATATGGGGAATGGGAGGATTGGGTAAAACTACCACAGCCAAAGCCATCTACAATCGAATTCATCGTAGATTCATGGGTAGATGTTTCATTGAAGATATTCGAGAAGTTTGTGAAACAGATAGAAGAGGGCATCTTCATTTGCAAGAACAACTTCTTTCAAATGTCCTTAAAACAAAGGTGAACATACAAAGCGTTGGGATAGGAAGAGCTATGATTGAGAGCAAACTTTCTAGAAGAAAGGCACTCATTGTACTTGATGATGTTATTGAGTTTGGCCAGTTAAAAGTCCTATGCGGAAATCGTAAATGGTTTGGTCAAGGAAGTATAGTAATCATTACAACTAGAGATGTACGCCTACTTCACAAACTTAAAGTTGATTTTGTTTATAAAATGGAGGAAATGGACGAAAATAAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTGGAGAAGCAAAACCAACAGAAGAGTTCGATGAACTTGCAAGAAATGTAGTTGCTTATTGTGGAGGACTACCGCTAGCTCTTGAAGTCATTGGTTCTTATTTAAGTGAGAGGAGGAAGAAAGAGTGGGAAAGTGTATTGTCAAAACTAAAAATAATTCCCAATGATCAAGTTCAAGAGAAATTAAGGATAAGCTATAATGGCTTAGGTGATCACATGGAAAAGGATATATTTCTTGATATTTGTTGTTTCTTTATTGGTAAAGATAGAGCCTATGTTACAGAGATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAACAGTTCTCATGGAGCGTAGCCTCGTAAAAGTTGCAAAGAACAACAAACTTGAAATGCATCCATTAATACGAGACATGGATAGAGAGATAATTCGTGAAAGTTCAACAAAGAAACCTGGGAAGCGCAGTCGATTGTGGTTTCAAGAGGATTCACTTAATGTATTGACAAAGAATACTGGGACAAAAGCTATTGAGGGATTGGCTCTGAAATTGCATTCAAGCAGCAGAGATTGCTTCAAAGCTTATGCTTTTAAGACAATGGATCAATTGAGACTATTGCAACTTGAGCATGTAGAACTCACTGGAGATTATGGGTATCTTCCTAAGCATCTGAGATGGATCTATTGGAAAAGATTTCCTTTAAAATACATGCCTAAAAACTTTTTTCTTGGAGGTGTAATTGCGATTGATTTAAAACACAGCAATCTTAGACTAGTCTGGAAAGAACCCCAGGTTTTGCCGTGGCTGAAAATCCTCAATCTTAGTCATTCTAAGTACTTGACAGAAACCCCTGACTTTTCAAATTTACCAAGTCTTGAAAAGCTCATTCTCAAAGATTGTCCAAGTTTGTGCAAGGTACACCAGTCCATTGGAGATCTCCAAAATCTTCTGTTGATAAATTTGAAGGACTGTACAAGCCTAAGCAATCTCCCAAGAGAGATATATAAGTTGAAATCTTTGGAAACTCTCATCCTATCCGGTTGTTCGAAGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAATACTTGACTACTCTAATTGCTAAAAATACAGCTGTGAAACAAGTGCCCTTTTCAATTGTAAGATTAAAAAGCATTGAATATATCTCCCTATGTGGATATGAAGGATTATCACGTAATGTTTTTCCTTCTATCATTTTGTCTTGGATGTCACCAACAATGAATCCCGTATCTCGTATTCGTTCATTTAGTGGCACTTCATCATCTTTAATTTCCATGGATATGCATAATAATAATTTGGGTGATCTAGTACCAATTCTTAGCAGCCTTTTAAATCTTCTAACTGTTTCGGTGCAATGTGACACGGGGTTTCAACTATCTGAAGAATTAAGAACAATTCAGGATGAGGAATATGGAAGTTACCGAGAATTGGAAATAGCATCATATGCATCACAAATTCCAAAGCATTATTTGAGCTCTTATTCGATTGGAATTGGAAGTTATCAAGAATTCTTCAATACCCTAAGCAGAAGCATATCTGAGGGATTGGCAACCAGTGCGGTTAGTGATGTTTTTCTCCCTAGTGATAATTATCCTTATTGGTTGGCCCATATGGAAGATGGACATTCAGTGTATTTCACTGTTCCCGACGATTTTCACATGAAGGGAATGACTTTGTGTGTTGTTTATTTATCAACCCCTGAAGACACTGCAATTGAATGTCTTATTAGTGTATCAATGGTTAATTACACAAAGGGCACCATCCAAATATTCAAGCGAGACACAGTAATTTCCTTTAACGATGAAGACTGGCAGGGCATAATATCACATTTGGGACCTGGAGACGAGGTGCAAATTTGTGTGACTTTTGAGCATGGATTGCTGGTTAAGAAGACAGCTGTCTATCTAATAATGTGCGATGAATCGATTGACAAGGAAACCATCCCTTCTCCTTATCCAAAAGAAAAGCAAAAGAAAAATGTAATCGTAGGATTCATAAAAGAAATTTGTAATGTGTAA 2964 0.3758 MNYPKGEELNEGLLRTIEGCRICVVVFSTNYPASSWCLKELEKIIECHKTYGHIVLPIFYDVDPSHIRHQRGAFGKNLKAFQGLWGKSVLSRWRTVLTEAANFSGWDVSNNRNEAQLVKEIAEDVLTKLDNTFMHMTEFPVGLESHVQEVIGYIENQSTKVCIVGIWGMGGLGKTTTAKAIYNRIHRRFMGRCFIEDIREVCETDRRGHLHLQEQLLSNVLKTKVNIQSVGIGRAMIESKLSRRKALIVLDDVIEFGQLKVLCGNRKWFGQGSIVIITTRDVRLLHKLKVDFVYKMEEMDENKSLELFSWHAFGEAKPTEEFDELARNVVAYCGGLPLALEVIGSYLSERRKKEWESVLSKLKIIPNDQVQEKLRISYNGLGDHMEKDIFLDICCFFIGKDRAYVTEILNGCGLHADIGITVLMERSLVKVAKNNKLEMHPLIRDMDREIIRESSTKKPGKRSRLWFQEDSLNVLTKNTGTKAIEGLALKLHSSSRDCFKAYAFKTMDQLRLLQLEHVELTGDYGYLPKHLRWIYWKRFPLKYMPKNFFLGGVIAIDLKHSNLRLVWKEPQVLPWLKILNLSHSKYLTETPDFSNLPSLEKLILKDCPSLCKVHQSIGDLQNLLLINLKDCTSLSNLPREIYKLKSLETLILSGCSKIDKLEEDIVQMEYLTTLIAKNTAVKQVPFSIVRLKSIEYISLCGYEGLSRNVFPSIILSWMSPTMNPVSRIRSFSGTSSSLISMDMHNNNLGDLVPILSSLLNLLTVSVQCDTGFQLSEELRTIQDEEYGSYRELEIASYASQIPKHYLSSYSIGIGSYQEFFNTLSRSISEGLATSAVSDVFLPSDNYPYWLAHMEDGHSVYFTVPDDFHMKGMTLCVVYLSTPEDTAIECLISVSMVNYTKGTIQIFKRDTVISFNDEDWQGIISHLGPGDEVQICVTFEHGLLVKKTAVYLIMCDESIDKETIPSPYPKEKQKKNVIVGFIKEICNV* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0695 987 Gene3D Ribonuclease Inhibitor 492 803 IPR032675 -
Gso16g0695 987 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 106 IPR035897 -
Gso16g0695 987 Pfam NB-ARC domain 144 365 IPR002182 GO:0043531
Gso16g0695 987 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 393 IPR027417 -
Gso16g0695 987 PRINTS Disease resistance protein signature 163 178 - -
Gso16g0695 987 PRINTS Disease resistance protein signature 240 254 - -
Gso16g0695 987 PRINTS Disease resistance protein signature 333 347 - -
Gso16g0695 987 PRINTS Disease resistance protein signature 642 658 - -
Gso16g0695 987 Gene3D - 298 382 IPR042197 -
Gso16g0695 987 Pfam TIR domain 5 134 IPR000157 GO:0007165
Gso16g0695 987 ProSiteProfiles TIR domain profile. 1 129 IPR000157 GO:0007165
Gso16g0695 987 Gene3D - 2 131 IPR035897 -
Gso16g0695 987 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 953 IPR044974 GO:0006952
Gso16g0695 987 Gene3D - 132 293 IPR027417 -
Gso16g0695 987 SUPERFAMILY L domain-like 492 764 - -
Gso16g0695 987 SUPERFAMILY "Winged helix" DNA-binding domain 369 475 IPR036390 -
Gso16g0695 987 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 5 953 - -
Gso16g0695 987 SMART till_3 2 103 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0695 Gso-Chr16 10457316 10465838 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0695 7 711 WRKY Transcription Factor Family AT4G12020 30.295 1.04e-85 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0695 - - gmx:100812634 1956.41