Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0689 ATGGAATTCGTGGCTTCTTCTTCTTCCTTCTCACAGTCGAAACCTTCATCATCCTTCTCAAAATCGAAACCCAAACGGCTGTACGATGTGTTCATAAATTTTAGGGGAGAAGACACTCGAGGGAAGTTCGTTTCTCATCTTCATTATGCCCTCTCAAAAGCTGGAGTCAACACTTTCATTGACGACGAGAACCTACTTAAGGGAATGACACTGAAAGATGAACTGATGCGAGCAATAGAAGGGTCTCAGATATCTTTGGTTGTTTTCTCCAAAAGCTATACTGAATCTACTTGGTGTCTTGATGAGCTTGAAAAAATTCTTGAATGCCGCAAACTTCATGACCAAATAGTTATGCCCATATTTTACGATATTGAACCATCCGTTGTTCGACATCAGAAGGGTGCTTTTGGAAAAGCTTTAAAATCAGCTGTAGAAAAAACATATTCAGGAGAGCATGCGGAACAAGTGTTGTGGAGGTGGAGCAGCGCACTCAACAGAGCTGCAGATTTATCCGGTTTCCATGTAGTAGATCGCAGGAATGAAGCTATACTAGTGAAGGAAATTGTTGAGGATGTTCTCCGCAAACTAGTCTACGAAGACTTGTACGTTACTGAATTTCCTGTTGGATTAGAATCCCGTGTACAAAAAGTAATTGGATTAATTAATAATCAATTCACCAAAGTTTGTATGATAGGGATATGGGGAATGGGAGGATTAGGTAAAACTAGCACAGCCAAAGGAATCTACAATCAAATTCATCGTAAATTCATTGATAAAAGTTTCATTGAAGATATTAGAGAAATTTGTCAAACAGAAGGAAGAGGGCATATCCTTTTACAAAAAAAACTTCTTTCAGATGTCCTAAAAACAGAGGTCGATATACTTAGTGTTGGGATGGGCAAAACTACTATCAAGGAAAGACTTTCTGGAAAAAGGATGCTCGTTGTACTTGATGATGTGAATGAGCTTGGCCAAGTAGAACACTTATGTGGAAATCGTGAATGGTTTGGTCAAGGAACTGTAATAATCATTACAACAAGAGATGTACGCCTACTGAAGCAACTTAAAGTTGATTCTATTTATAAATTGGAGGAAATGGACAAAAACGAGTCCCTTGAGCTTTTTAGTTGGCATGCTTTTGGAAATGCAGAACCAAGAGAAGACTTCAAGGAACTTGCAAGAAGTGTAGTTGCTTATTGTGGAGGACTACCACTAGCTCTTCGAGTCCTTGGTGCTTATTTAATTGAGAGGCCAAAGCAACTGTGGGAAAGTGTATTGTCAAAACTAGAAAAAATTCCCAATGATCAAGTACAGAAGAAATTAAGAATAAGCTTTGATGGTTTAAGTGACCCCTTGGAAAAGGATATATTCCTTGATGTATGTTGTTTCTTTATTGGTAAAGACAGAGGCTATGTTACTGAAATACTAAATGGCTGTGGACTACATGCTGATATTGGAATAACAGTTCTCTTAGAGCGTAGCCTCATCAAAGTTGAGAAGAACAACAAACTTGGAATGCATCCTTTGTTACGAGACATGGGAAGAGAGATAATTTGTGAAAGTTCACGAAACAAACCTGGAAAGCGCAGTCGATTGTGGTTTCAAAAGGATGTACTTGATGTATTGACAAAGAATACTGGGACAGAAACTATTGTGGGTTTGGCGCTGAAATTGCATTATAGCAGTAGAGATTGCTTCAATGCTTATGCTTTTAAGGAAATGAAGAGTTTGAGACTTTTGCAACTTGATCATGTACATATCACTGGAGATTATCAGTATCTTTCTAAGCAACTGAGATGGGTCTGTTGGCAAGGGTTTCCTTCAAAATACATACCTAACAATTTCAATCTGGAAGGTGTAATTGCAATTGATTTAAAACACAGTAATCTTAGACTTGTCTGGAAGAAACCCCAGGTTTTGCAGTGGCTAAAAATCCTCAATCTTAGTCACTCCAAGTACTTGACAGCAACCCCTAACTTTTCAGGACTACCAAGTCTTGAAAAGCTGATTCTCAAAGATTGTCCAAGTTTGAGCAAGGTACACAAATCCATTGGAGATCTCCATAAACTTGTATTGATAAATATGAAGGACTGTACAAGCCTAAGCAATCTCCCCAGAGAGATGTATCAGTTGAAATCTGTGAAAACTCTCAACCTATCTGGTTGTTCAAAGATTGACAAATTGGAAGAAGATATAGTGCAGATGGAATCCTTAACAACTCTAATTGCTGAAAATACTGCTGTTAAACAAGTGCCCTTTTCAATTGTAAGCTTAAAAAGCATTGGATATATATCCCTATGTGGATATGAAGGATTGTCACGTAATGTTTTTCCATCTATCATTTGGTCTTGGATGTCACCAACAATGAATCCTCTATCTTGTATTCATTCATTTTCTGGCACTTCATCATCTCTAGTTTCCATCGATATGCAGAATAATGATTTGGGTGATCTGGTACCAGTGCTTACCAACCTTTCAAACCTTCGAAGTGTTTTGGTGCAATGTGACACAGAAGCTGAACTATCTAAACAATTAGGAACAATTTTGGATGATGCATATGGTGTAAATTTTACAGAATTGGAAATAACATCAGATACATCTCAAATTTCAAAGCATTACTTGAAGTCTTATTTGATTGGAATTGGAAGTTACCAAGAATACTTCAATACTCTCAGTGATAGCATATCAGAGAGATTGGAAACCAGTGAGTCTTGTGATGTTTCTCTCCCAGGTGACAACGATCCTTATTGGTTGGCCCATATCGGCATGGGACATTCAGTGTATTTCACTGTACCTGAGAATTGTCACATGAAGGGAATGGCTTTGTGTGTTGTTTATTTATCAACCCCTGAAAAGACAGCAACTGAATGTCTTATTAGTGTCTTAATGGTTAATTACACTAAGTGCAGCATCCTGATATGCAAGCGAGACACAGTAATTTCCTTTAATGATGAAGATTGGGAGGGCATAATGTCACATTTGGGATCTGGAGACAAGGTGGAGATTTTTGTGGCTTTTGGGCATGGATTAGAGATCAAGAAGACAGCTGTCTATCTAATGTGTGATGAATCAATTGACATGAAAATGGTGCCTTCTCCTGAGCCAAAGAAAGTGTCAAAGAAAAATGCCTTTGTAAGAATCATAAAGAAAATTGTAACGAGCAAGATTCAAGAGCAGTAG 3180 0.3792 MEFVASSSSFSQSKPSSSFSKSKPKRLYDVFINFRGEDTRGKFVSHLHYALSKAGVNTFIDDENLLKGMTLKDELMRAIEGSQISLVVFSKSYTESTWCLDELEKILECRKLHDQIVMPIFYDIEPSVVRHQKGAFGKALKSAVEKTYSGEHAEQVLWRWSSALNRAADLSGFHVVDRRNEAILVKEIVEDVLRKLVYEDLYVTEFPVGLESRVQKVIGLINNQFTKVCMIGIWGMGGLGKTSTAKGIYNQIHRKFIDKSFIEDIREICQTEGRGHILLQKKLLSDVLKTEVDILSVGMGKTTIKERLSGKRMLVVLDDVNELGQVEHLCGNREWFGQGTVIIITTRDVRLLKQLKVDSIYKLEEMDKNESLELFSWHAFGNAEPREDFKELARSVVAYCGGLPLALRVLGAYLIERPKQLWESVLSKLEKIPNDQVQKKLRISFDGLSDPLEKDIFLDVCCFFIGKDRGYVTEILNGCGLHADIGITVLLERSLIKVEKNNKLGMHPLLRDMGREIICESSRNKPGKRSRLWFQKDVLDVLTKNTGTETIVGLALKLHYSSRDCFNAYAFKEMKSLRLLQLDHVHITGDYQYLSKQLRWVCWQGFPSKYIPNNFNLEGVIAIDLKHSNLRLVWKKPQVLQWLKILNLSHSKYLTATPNFSGLPSLEKLILKDCPSLSKVHKSIGDLHKLVLINMKDCTSLSNLPREMYQLKSVKTLNLSGCSKIDKLEEDIVQMESLTTLIAENTAVKQVPFSIVSLKSIGYISLCGYEGLSRNVFPSIIWSWMSPTMNPLSCIHSFSGTSSSLVSIDMQNNDLGDLVPVLTNLSNLRSVLVQCDTEAELSKQLGTILDDAYGVNFTELEITSDTSQISKHYLKSYLIGIGSYQEYFNTLSDSISERLETSESCDVSLPGDNDPYWLAHIGMGHSVYFTVPENCHMKGMALCVVYLSTPEKTATECLISVLMVNYTKCSILICKRDTVISFNDEDWEGIMSHLGSGDKVEIFVAFGHGLEIKKTAVYLMCDESIDMKMVPSPEPKKVSKKNAFVRIIKKIVTSKIQEQ* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0689 1059 Gene3D - 201 360 IPR027417 -
Gso16g0689 1059 Gene3D - 25 200 IPR035897 -
Gso16g0689 1059 PRINTS Disease resistance protein signature 230 245 - -
Gso16g0689 1059 PRINTS Disease resistance protein signature 307 321 - -
Gso16g0689 1059 PRINTS Disease resistance protein signature 400 414 - -
Gso16g0689 1059 PRINTS Disease resistance protein signature 709 725 - -
Gso16g0689 1059 Gene3D Ribonuclease Inhibitor 556 875 IPR032675 -
Gso16g0689 1059 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 30 1020 - -
Gso16g0689 1059 Pfam TIR domain 28 197 IPR000157 GO:0007165
Gso16g0689 1059 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 30 1020 IPR044974 GO:0006952
Gso16g0689 1059 SUPERFAMILY L domain-like 506 831 - -
Gso16g0689 1059 SMART till_3 27 170 IPR000157 GO:0007165
Gso16g0689 1059 Gene3D - 365 449 IPR042197 -
Gso16g0689 1059 SUPERFAMILY Toll/Interleukin receptor TIR domain 21 173 IPR035897 -
Gso16g0689 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 459 IPR027417 -
Gso16g0689 1059 MobiDBLite consensus disorder prediction 1 22 - -
Gso16g0689 1059 ProSiteProfiles TIR domain profile. 26 196 IPR000157 GO:0007165
Gso16g0689 1059 Pfam NB-ARC domain 212 435 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0689 Gso-Chr16 10155172 10159603 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0689 12 832 WRKY Transcription Factor Family AT4G12020 29.265 1.51e-86 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0689 - - gmx:100806743 2081.6