Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0686 ATGCTTCGGTTTCTCCCAACTGAGTCAAACATTTTCCAGTCTTTTCCACACTTCGCAGTTGTAAAAGCTCTGCGAGTGTTCACTTCCGCCACCTGTTCGACCATTGGCCTCACCCAAACCCAGGTTGAATTTGAAGATGATAAAAACAAGTGTAGTGATGCTGCTGAGCTTTTGAGCAAATGGGGTTGTAGTGATGATGATTTGGTGAGAATATTCTCACGTTGCCCCTCCTTGCGCAATGCTGATCCCATGCAGGTTCAGTCTAAACTGTGCCTGCTGAGTGATTTGGGCTTGTGTGCATCTGAACTTGTAAAGATTGTCAATTGTAGGCCACGGTTTTTCCGGTCTCGGATTAATAGTTGCTTAGAAGAGAGGATGGCGCATCTTACATCATTGTTTGAGACGAAAGAAGTGCTTCAGAAGGCAATTGTGAGGAACCCTTCGTTGCTGCTATCTGCGGGTCGCTATAATGTGAAGGCAACAGTTGAGCTCTATGAGAAGTTGGGTGTTAAGAAAGAGGACTTGATTCAGATGCTCCTTTTGCGGCCCACGGTTATTTCGAGGACTTCCTTTGATGCTGAGAAGCTGGAATATTTAAGCAAGACTGGGCTTACTAAGGATTCCAAGATGTATAAATATGTGGTGACATTAATAGGAGTCTCTCGCGTGGAAACGATTCGGGATAAGGTGGCAAATTTCGTGAAATTTGGGTTTTCCGAAGAGGAGATATTTGGTCTTGTGGGGAAGTCTCCTAATGTGTTGACATTGTCAACGGAAAAGGTTCAGAGGAACATGACTTTCATTTTGGGAACGATGAAGCTTGATGCTAAGATGGTTCTAAAGCTGCCGTATCTCTTATATGCCAATGTGGATACTGTTTTGAAGCCAAGAGTGCTTCTAGCATTGAAGATGCAAGATATGGATGCAGAGTTGCAAATCATGGGACCAACGATCGTAAGCTCACTGAGGATGCCAGAGCAGAGATTTTTAAAGTTGTTTATCCAATGCCATGACGAGGATGTTGCAAATCAATTGATGGAATTCTATAAAAGGACAAAAGAGGTGAAGAGATTAGGAGAGTCATCAAAGAAGTACAGTAAGAGTGGATTCCCTTTCTGA 1119 0.4334 MLRFLPTESNIFQSFPHFAVVKALRVFTSATCSTIGLTQTQVEFEDDKNKCSDAAELLSKWGCSDDDLVRIFSRCPSLRNADPMQVQSKLCLLSDLGLCASELVKIVNCRPRFFRSRINSCLEERMAHLTSLFETKEVLQKAIVRNPSLLLSAGRYNVKATVELYEKLGVKKEDLIQMLLLRPTVISRTSFDAEKLEYLSKTGLTKDSKMYKYVVTLIGVSRVETIRDKVANFVKFGFSEEEIFGLVGKSPNVLTLSTEKVQRNMTFILGTMKLDAKMVLKLPYLLYANVDTVLKPRVLLALKMQDMDAELQIMGPTIVSSLRMPEQRFLKLFIQCHDEDVANQLMEFYKRTKEVKRLGESSKKYSKSGFPF* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0686 372 Gene3D Transcription termination factor 3, mitochondrial 135 344 IPR038538 -
Gso16g0686 372 Pfam mTERF 109 329 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 Pfam mTERF 50 152 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 PANTHER CGI-12 PROTEIN-RELATED 16 372 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 140 171 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 69 99 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 276 308 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 SMART mt_12 208 239 IPR003690 GO:0003690|GO:0006355
Gso16g0686 372 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 16 372 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso16g0686 mTERF 1.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0686 K15032 - gmx:100799629 723.391