Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0663 ATGAAGTTCAACATTGCAAATCCAACCACTGGCTGCCAGAAGAAGCTCGAGATCGATGATGATCAGAAGCTACGGGCATTTTGGGACAAGAGGATTTCACAAGAGGTCAACGGAGATGCTCTGGGTGAGGAATTTAAAGGATATGTCTTCAAAATCACTGGTGGTTGTGACAAACAAGGATTTCCAATGAAGCAGGGAGTGCTAACACCTGGCTGTGTTCATCTTTTGCTCCACAGAGGAACTCCTTGCTTCCGTGGATACGGAAGGCGCAACGAAGAGCGAAGGAGGAAATCTGTTCGCGGGTGCATTGTCAGCCCAGATCTCTCTGTTCTGAACCTGGTAATTGTGAAGAAGGGCGAAAGTGATTTACCAGGACTGACTGATGTTGAAAAGCCAAGAATGAGGGGTCCAAAGAGAGCATCCAAAATCCGGAAAAAGGTAAGCAAAGCTCCAAAGATTCAGCGACTCGTCACTCCACTGACACTGCAAAGGAAGCGGGCAAGAATTGCTGATAAGAAGAAGAGAATCGCAAAGGCAAAATCAGAGGCAGCGGAGTATCAGAAACTTCTTGCCTCCAGATTGAAGGAGCAGAGGGAACGCCGTAGTGAGAGTTAG 615 0.4748 MKFNIANPTTGCQKKLEIDDDQKLRAFWDKRISQEVNGDALGEEFKGYVFKITGGCDKQGFPMKQGVLTPGCVHLLLHRGTPCFRGYGRRNEERRRKSVRGCIVSPDLSVLNLVIVKKGESDLPGLTDVEKPRMRGPKRASKIRKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQRERRSES* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0663 204 PIRSF RPS6e 1 147 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 PIRSF RPS6e 144 204 IPR014401 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 Gene3D - 144 204 - -
Gso16g0663 204 Coils Coil 162 189 - -
Gso16g0663 204 ProSitePatterns Ribosomal protein S6e signature. 52 63 IPR018282 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 PANTHER 40S RIBOSOMAL PROTEIN S6 1 145 - -
Gso16g0663 204 PANTHER 40S RIBOSOMAL PROTEIN S6 145 204 - -
Gso16g0663 204 SMART Ribosomal_S6e_2 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 Pfam Ribosomal protein S6e 1 128 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 PANTHER 40S RIBOSOMAL PROTEIN S6 1 145 IPR001377 GO:0003735|GO:0005840|GO:0006412
Gso16g0663 204 PANTHER 40S RIBOSOMAL PROTEIN S6 145 204 IPR001377 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0663 Gso-Chr16 9288628 9291890 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0663 1 204 Cytoplasmic Ribosomal Protein Gene Family AT5G10360 80.882 1.86e-114 322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0663 16 9288628 9291890 Gso3g0797 3 28710068 28710565 GST