Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0662 ATGGTCAAGTCATGTTGCGTTATGTGCTTGTGTTTGATCTTACTTCACATTTTCCTGCGCTTTGTGCCAATACAGTCAGCACCTGAAAGTGCCATTGTGACACAGATTCCTGGCTTCAGTGGCACTCTACCTTCCAAGCACTATGCTGGGTATGTGACGGTGGATAAGAGTCATGGGAGGAACTTGTACTACTATTTTGTTGAATCAGAGGGTAAACCTTCCGAGGACCCTGTGGTTCTGTGGCTTAATGGGGGACCTGGCTGCTCTAGCTTCGATGGATTCATATATGAGCATGGTCCTTTTAATTTTGAGGCAGCAAAGACAAGGGGGGGTCTTCCCACACTGCACCTCAATCCATACAGCTGGTCAAAGGTTTCCAGTGTTATATATTTGGATTCTCCTGCTGGTGTGGGGTTTTCATACTCAGAGAATAAAACTGATTACATAACTGGAGACATAAAGACTGCCACTGATTCTCATGCCTTTCTCCTTAAGTGGTTTGAACTATACCCCGAGTTCCTTTCCAACCCGTTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGTGCCTACTCTCGCTTCTGAAGTAGTGAAAGGAATTGATGCCGGGGTGGAGCCCAAACTGAATTTCAAGGGTTACATGGTTGGAAATGGTGTCACAGATGAACAAATTGATGGCAATGCTCTTGTTCCATTTGTACATGGGATGGGACTTATCCCAGATGAACTGTTTGAGGAGGTTAACCGTGAGTGCAATGGGAATTTTTATGATCCAACAAGTGCTAATTGTTCTAGCAAGCTTTCAAAAGTTGATGAGTTGGTTGATGAGATAAACATATATAACATTCTAGAACCATGCTATCACGGCACAGAAGCAGAGAAGATTACAGAATCCTATATTAGGATGCCATCTACCTTCCGGAAGTTGGGTGAGACCGAAAGACCTTTTCCTGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTAAGAGCTCCTGTGAGAGATGGAATTGTACCAACTTGGCCACAACTGATGAATAGTAAATCTGCTCCACCATGCACGGACGATGAGGTTGCAAATTCATGGTTAAACAATGAAGCAGTCAGGACAGCAATTCATACTGCACAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACTGACAGAATTTACTTCGATCATGATGCTGGGAGCATGATCAAGTACCACAAGAACTTAACTTCCAAAGGTTATCGTGCACTTATATTCAGCGGCGATCATGACATGTGTGTTCCATACACGGGGAGTCAAGTGTGGACGAGATCAGTTGGATACAAGATTGTTGATGAATGGAGGCCTTGGTCATCCAATGGTCAAGTTGCTGGGTATACACAAGGATACGACAAAAATCTTACTTTTCTGACCGTAAAGGGATCTGGGCATACTGTTCCGGAATATAAACCACGAGAGGCATTGGACTTTTACAAACGCTTTCTCGCTGGATTGCCAATATGA 1497 0.4402 MVKSCCVMCLCLILLHIFLRFVPIQSAPESAIVTQIPGFSGTLPSKHYAGYVTVDKSHGRNLYYYFVESEGKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTRGGLPTLHLNPYSWSKVSSVIYLDSPAGVGFSYSENKTDYITGDIKTATDSHAFLLKWFELYPEFLSNPFFIAGESYAGVYVPTLASEVVKGIDAGVEPKLNFKGYMVGNGVTDEQIDGNALVPFVHGMGLIPDELFEEVNRECNGNFYDPTSANCSSKLSKVDELVDEINIYNILEPCYHGTEAEKITESYIRMPSTFRKLGETERPFPVRKRMFGRAWPLRAPVRDGIVPTWPQLMNSKSAPPCTDDEVANSWLNNEAVRTAIHTAQKSVVSSWDLCTDRIYFDHDAGSMIKYHKNLTSKGYRALIFSGDHDMCVPYTGSQVWTRSVGYKIVDEWRPWSSNGQVAGYTQGYDKNLTFLTVKGSGHTVPEYKPREALDFYKRFLAGLPI* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0662 498 Gene3D alpha/beta hydrolase 25 319 IPR029058 -
Gso16g0662 498 Gene3D - 351 497 - -
Gso16g0662 498 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 19 495 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 PRINTS Carboxypeptidase C serine protease (S10) family signature 465 478 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 SUPERFAMILY alpha/beta-Hydrolases 33 497 IPR029058 -
Gso16g0662 498 Pfam Serine carboxypeptidase 37 494 IPR001563 GO:0004185|GO:0006508
Gso16g0662 498 ProSitePatterns Serine carboxypeptidases, histidine active site. 465 482 IPR033124 GO:0004185
Gso16g0662 498 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Gso16g0662 498 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 19 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0662 Gso-Chr16 9268229 9278184 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0662 359 498 Calmodulin-binding Proteins AT2G22960 45.000 1.19e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0662 K16296 - gmx:100792057 1044.65